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Rhox11 Gene Detail
Summary
  • Symbol
    Rhox11
  • Name
    reproductive homeobox 11
  • Synonyms
    LOC194738, MGC:58663
  • Feature Type
    protein coding gene
  • IDs
    MGI:2681831
    NCBI Gene: 194738
  • Member of
    Rhox cluster
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:37165475-37174016 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 22.33 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    208 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2681831
 protein coding gene ChrX:37165471-37174018 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035659
 protein coding gene ChrX:33015676-33025197 (-)
A/J MGP_AJ_G0035643
 protein coding gene ChrX:33077766-33087414 (-)
AKR/J MGP_AKRJ_G0035561
 protein coding gene ChrX:33818159-33826680 (-)
BALB/cJ MGP_BALBcJ_G0035628
 protein coding gene ChrX:32780696-32789243 (-)
C3H/HeJ MGP_C3HHeJ_G0035332
 protein coding gene ChrX:33368789-33377336 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036158
 protein coding gene ChrX:33751306-33759853 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033010
 protein coding gene ChrX:31430337-31438806 (-)
CAST/EiJ MGP_CASTEiJ_G0034622
 protein coding gene ChrX:21389386-21397936 (-)
CBA/J MGP_CBAJ_G0035306
 protein coding gene ChrX:34592177-34600724 (-)
DBA/2J MGP_DBA2J_G0035460
 protein coding gene ChrX:32916404-32925922 (-)
FVB/NJ MGP_FVBNJ_G0035408
 protein coding gene ChrX:32646115-32657244 (-)
LP/J MGP_LPJ_G0035548
 protein coding gene ChrX:33407373-33415888 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035447
 protein coding gene ChrX:34944801-34954401 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036175
 protein coding gene ChrX:33055374-33063921 (-)
PWK/PhJ MGP_PWKPhJ_G0034323
 protein coding gene ChrX:20972353-20980957 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034169
 protein coding gene ChrX:21870329-21878922 (-)
WSB/EiJ MGP_WSBEiJ_G0034769
 protein coding gene ChrX:32753004-32761574 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    713
  • Tissues
    5
  • cDNA Data
    5
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 194738 NCBI Gene Model | MGI Sequence Detail 8542 C57BL/6J ±  kb
transcript NM_198598 RefSeq | MGI Sequence Detail 805 Not Specified  
polypeptide NP_941000 RefSeq | MGI Sequence Detail 206 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR001356 Homeobox domain
    IPR009057 Homeobox-like domain superfamily
    IPR050649 Paired Homeobox Transcription Factors
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
Other
Accession IDs
less
MGI:2684885
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
  • Latest
    J:306454 Tan K, et al., The Rhox gene cluster suppresses germline LINE1 transposition. Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):e2024785118
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory