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Lypd10 Gene Detail
Summary
  • Symbol
    Lypd10
  • Name
    Ly6/PLAUR domain containing 10
  • Synonyms
    BC049730, MGC:58740
  • Feature Type
    protein coding gene
  • IDs
    MGI:2681843
    NCBI Gene: 232972
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:24408667-24413960 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 12.38 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    234 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2681843
 protein coding gene Chr7:24408645-24413960 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031840
 protein coding gene Chr7:23072044-23080882 (+)
A/J MGP_AJ_G0031819
 protein coding gene Chr7:22526599-22533199 (+)
AKR/J MGP_AKRJ_G0031748
 protein coding gene Chr7:23027115-23033247 (+)
BALB/cJ MGP_BALBcJ_G0031825
 protein coding gene Chr7:22729424-22735080 (+)
C3H/HeJ MGP_C3HHeJ_G0031545
 protein coding gene Chr7:23443043-23452962 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032288
 protein coding gene Chr7:23806663-23827382 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0031510
 protein coding gene Chr7:24722876-24733882 (+)
DBA/2J MGP_DBA2J_G0031664
 protein coding gene Chr7:22436565-22440018 (+)
FVB/NJ MGP_FVBNJ_G0031617
 protein coding gene Chr7:22405926-22410048 (+)
LP/J MGP_LPJ_G0031743
 protein coding gene Chr7:23429637-23440461 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031654
 protein coding gene Chr7:24463368-24469935 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032320
 protein coding gene Chr7:22757877-22763323 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0030440
 protein coding gene Chr7:14036490-14043255 (+)
WSB/EiJ MGP_WSBEiJ_G0030989
 protein coding gene Chr7:22883685-22898514 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    771
  • Tissues
    11
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045587 Ensembl Gene Model | MGI Sequence Detail 5294 C57BL/6J ±  kb
transcript ENSMUST00000051714 Ensembl | MGI Sequence Detail 1172 Not Applicable  
polypeptide ENSMUSP00000053275 Ensembl | MGI Sequence Detail 246 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR051899 Fertilization and immune response mediator protein
    IPR016054 Ly-6 antigen/uPA receptor-like
  • GlyGen
    Q810N3 1 site, 1 N-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:6278304
References
more
  • Summaries
    All 15
    Developmental Gene Expression 1
    Gene Ontology 1
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
  • Latest
    J:270449 Loughner CL, et al., Organization, evolution and functions of the human and mouse Ly6/uPAR family genes. Hum Genomics. 2016 Apr 21;10:10
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory