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Nlrp1a Gene Detail
Summary
  • Symbol
    Nlrp1a
  • Name
    NLR family, pyrin domain containing 1A
  • Synonyms
    Nalp1, Nalp1a
  • Feature Type
    protein coding gene
  • IDs
    MGI:2684861
    NCBI Gene: 195046
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:70983062-71035530 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 43.21 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    499 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2684861
 protein coding gene Chr11:70982023-71035780 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018624
 protein coding gene Chr11:71660003-71839299 (-)
A/J MGP_AJ_G0018592
 protein coding gene Chr11:68953742-69001305 (-)
AKR/J MGP_AKRJ_G0018561
 protein coding gene Chr11:71012821-71063493 (-)
BALB/cJ MGP_BALBcJ_G0018564
 protein coding gene Chr11:69244008-69356006 (-)
C3H/HeJ MGP_C3HHeJ_G0018377
 protein coding gene Chr11:71052312-71158430 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019015
 protein coding gene Chr11:73833364-73900024 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0017932
 protein coding gene Chr11:71314032-71368718 (-)
CBA/J MGP_CBAJ_G0018349
 protein coding gene Chr11:77169265-77269491 (-)
DBA/2J MGP_DBA2J_G0018459
 protein coding gene Chr11:68505164-68556960 (-)
FVB/NJ MGP_FVBNJ_G0018449
 protein coding gene Chr11:68155043-68334037 (-)
LP/J MGP_LPJ_G0018529
 protein coding gene Chr11:72250462-72348911 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018472
 protein coding gene Chr11:77702034-77753755 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019057
 protein coding gene Chr11:71265173-71369015 (-)
PWK/PhJ MGP_PWKPhJ_G0017706
 protein coding gene Chr11:69175632-69228538 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0017986
 protein coding gene Chr11:70941528-70992093 (-)



Homology
more
  • Human Ortholog
    NLRP1, NLR family pyrin domain containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NLRP1, NLR family pyrin domain containing 1
  • Synonyms
    AIADK, CARD7, CIDED, CLR17.1, DEFCAP, DEFCAP-L/S, JRRP, MSPC, NAC, NALP1, PP1044, SLEV1, VAMAS1
  • Links
    NCBI Gene ID: 22861
    neXtProt AC: NX_Q9C000
    UniProt: Q9C000

  • Chr Location
    17p13.2; chr17:5499415-5619424 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human NLRP1 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    32 phenotypes from 4 alleles in 4 genetic backgrounds
    17 phenotypes from multigenic genotypes
    26 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice heterozygous for an ENU-induced allele develop a multi-organ neutrophilic inflammatory disease. Homozygotes for the same ENU-induced allele develop a similar but lethal condition and exhibit neutrophilia, lymphopenia, splenomegaly, loss of peritoneal macrophages, and premature death.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    57
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000069830 Ensembl Gene Model | MGI Sequence Detail 52469 C57BL/6J ±  kb
    transcript ENSMUST00000048514 Ensembl | MGI Sequence Detail 3903 Not Applicable  
    polypeptide ENSMUSP00000038186 Ensembl | MGI Sequence Detail 1300 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 3
      cDNA 3

      Microarray probesets 1
    Other
    Accession IDs
    less
    MGI:2684860
    References
    more
    • Summaries
      All 61
      Gene Ontology 8
      Phenotypes 26
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory