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Gm53 Gene Detail
Summary
  • Symbol
    Gm53
  • Name
    predicted gene 53
  • Synonyms
    LOC193022
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2684899
    NCBI Gene: 193022
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:96142486-96155310 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 59.76 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    326 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2684899
 lncRNA gene Chr11:96141924-96160126 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005292
 lincRNA gene Chr11:98558576-98572228 (+)
A/J MGP_AJ_G0005276
 lincRNA gene Chr11:94535840-94549511 (+)
AKR/J MGP_AKRJ_G0005254
 lincRNA gene Chr11:97450884-97464824 (+)
BALB/cJ MGP_BALBcJ_G0005257
 lincRNA gene Chr11:95027527-95045071 (+)
C3H/HeJ MGP_C3HHeJ_G0005206
 lincRNA gene Chr11:97592660-97606340 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005409
 lincRNA gene Chr11:101638025-101651754 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004801
 lincRNA gene Chr11:92022274-92036025 (+)
CAST/EiJ MGP_CASTEiJ_G0005153
 lincRNA gene Chr11:98411455-98425244 (+)
CBA/J MGP_CBAJ_G0005196
 lincRNA gene Chr11:105800069-105816079 (+)
DBA/2J MGP_DBA2J_G0005213
 lincRNA gene Chr11:94103048-94116730 (+)
FVB/NJ MGP_FVBNJ_G0005238
 lincRNA gene Chr11:93581835-93595824 (+)
LP/J MGP_LPJ_G0005294
 lincRNA gene Chr11:99095249-99112422 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005220
 lincRNA gene Chr11:105796980-105813715 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005413
 lincRNA gene Chr11:97759546-97781008 (+)
PWK/PhJ MGP_PWKPhJ_G0005102
 lincRNA gene Chr11:95053196-95066979 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005024
 lincRNA gene Chr11:97491759-97506734 (+)
WSB/EiJ MGP_WSBEiJ_G0005201
 lincRNA gene Chr11:97652111-97667218 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    33
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 193022 NCBI Gene Model | MGI Sequence Detail 12825 C57BL/6J ±  kb
transcript NR_037977 RefSeq | MGI Sequence Detail 617 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 18
    Developmental Gene Expression 1
    Phenotypes 9
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory