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Ccdc110 Gene Detail
Summary
  • Symbol
    Ccdc110
  • Name
    coiled-coil domain containing 110
  • Synonyms
    LOC212392
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685018
    NCBI Gene: 212392
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:46387656-46397182 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 25.92 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    336 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685018
 protein coding gene Chr8:46387656-46398643 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033579
 protein coding gene Chr8:45002434-45011959 (+)
A/J MGP_AJ_G0033561
 protein coding gene Chr8:43275015-43284542 (+)
AKR/J MGP_AKRJ_G0033486
 protein coding gene Chr8:44542340-44551856 (+)
BALB/cJ MGP_BALBcJ_G0033558
 protein coding gene Chr8:43454823-43464338 (+)
C3H/HeJ MGP_C3HHeJ_G0033267
 protein coding gene Chr8:45064357-45073883 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034074
 protein coding gene Chr8:46710066-46719580 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031023
 protein coding gene Chr8:39548241-39557629 (+)
CAST/EiJ MGP_CASTEiJ_G0032593
 protein coding gene Chr8:44506829-44516342 (+)
CBA/J MGP_CBAJ_G0033246
 protein coding gene Chr8:48599161-48608667 (+)
DBA/2J MGP_DBA2J_G0033399
 protein coding gene Chr8:43082447-43091967 (+)
FVB/NJ MGP_FVBNJ_G0033340
 protein coding gene Chr8:42582305-42591803 (+)
LP/J MGP_LPJ_G0033487
 protein coding gene Chr8:45020197-45029714 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033385
 protein coding gene Chr8:48675173-48684691 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034092
 protein coding gene Chr8:44702410-44711932 (+)
PWK/PhJ MGP_PWKPhJ_G0032301
 protein coding gene Chr8:42603479-42615937 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032137
 protein coding gene Chr8:43855921-43865423 (+)
WSB/EiJ MGP_WSBEiJ_G0032709
 protein coding gene Chr8:44958187-44967724 (+)



Homology
more
  • Human Ortholog
    CCDC110, coiled-coil domain containing 110
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC110, coiled-coil domain containing 110
  • Synonyms
    CT52, KM-HN-1, KMHN1
  • Links
    NCBI Gene ID: 256309
    neXtProt AC: NX_Q8TBZ0
    UniProt: Q8TBZ0

  • Chr Location
    4q35.1; chr4:185445182-185471752 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    727
  • Tissues
    1
  • cDNA Data
    8
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000071104 Ensembl Gene Model | MGI Sequence Detail 9527 C57BL/6J ±  kb
    transcript ENSMUST00000095326 Ensembl | MGI Sequence Detail 2656 Not Applicable  
    polypeptide ENSMUSP00000092964 Ensembl | MGI Sequence Detail 848 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 8
      cDNA 8

      Microarray probesets 2
    References
    more
    • Summaries
      All 27
      Developmental Gene Expression 1
      Gene Ontology 3
      Phenotypes 6
    • Earliest
      J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
    • Latest
      J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory