Itprid1 MGI Mouse Gene Detail - MGI:2685304 - ITPR interacting domain containing 1

Symbol

Itprid1
Name

ITPR interacting domain containing 1
Synonyms

Ccdc129, D530004J12Rik

Feature Type

protein coding gene
IDs

MGI:2685304
NCBI Gene: 232016
Alliance

gene page
Transcription Start Sites

1 TSS

Sequence Map

Chr6:55813880-55955720 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 6, 27.65 cM
Mapping Data

1 experiment

SNPs within 2kb

4083 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2685304	protein coding gene	Chr6:55782306-55955872 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0030776	protein coding gene	Chr6:55267689-55413853 (+)
A/J	MGP_AJ_G0030745	protein coding gene	Chr6:52693043-52830594 (+)
AKR/J	MGP_AKRJ_G0030672	protein coding gene	Chr6:54477992-54616730 (+)
BALB/cJ	MGP_BALBcJ_G0030757	protein coding gene	Chr6:53083375-53218369 (+)
C3H/HeJ	MGP_C3HHeJ_G0030470	protein coding gene	Chr6:54511674-54649883 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0031212	protein coding gene	Chr6:56498814-56649120 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0028418	protein coding gene	Chr6:50301551-50440142 (+)
CAST/EiJ	MGP_CASTEiJ_G0029873	protein coding gene	Chr6:54381972-54536224 (+)
CBA/J	MGP_CBAJ_G0030444	protein coding gene	Chr6:58796964-58958436 (+)
DBA/2J	MGP_DBA2J_G0030594	protein coding gene	Chr6:52596106-52733338 (+)
FVB/NJ	MGP_FVBNJ_G0030546	protein coding gene	Chr6:52192474-52328756 (+)
LP/J	MGP_LPJ_G0030679	protein coding gene	Chr6:55195616-55342716 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0030580	protein coding gene	Chr6:61289595-61445121 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0031242	protein coding gene	Chr6:54463537-54607763 (+)
PWK/PhJ	MGP_PWKPhJ_G0029586	protein coding gene	Chr6:52270367-52410026 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0029420	protein coding gene	Chr6:53824398-53980926 (+)
WSB/EiJ	MGP_WSBEiJ_G0029950	protein coding gene	Chr6:54496444-54642604 (+)

Human Ortholog

ITPRID1, ITPR interacting domain containing 1

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

ITPRID1, ITPR interacting domain containing 1
Synonyms

CCDC129
Links

HGNC:27363

NCBI Gene ID: 223075

neXtProt AC: NX_Q6ZRS4

UniProt: Q6ZRS4
Chr Location

7p14.3; chr7:31514090-31658720 (+) GRCh38

MGI Vertebrate Homology

Itprid1 stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: ITPRID1
Gene Tree

Itprid1

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Phenotype Summary

4 phenotype references

All Mutations and Alleles

4
Endonuclease-mediated

1
Targeted

3
Incidental Mutations

Mutagenetix , APF
Find Mice (IMSR)

69 strains or lines available

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All GO Annotations

1
GO References

1

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

706
cDNA Data

7

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase itprid1

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All Sequences

40
RefSeq

14
UniProt

1
CCDS

CCDS39493.1

Ensembl

ENSMUSG00000037973 (Evidence)
NCBI Gene

232016

			Length	Strain/Species	Flank
genomic	ENSMUSG00000037973	Ensembl Gene Model \| MGI Sequence Detail	141841	C57BL/6J	± kb
transcript	ENSMUST00000044729	Ensembl \| MGI Sequence Detail	3431	Not Applicable
polypeptide	ENSMUSP00000045332	Ensembl \| MGI Sequence Detail	1034	Not Applicable

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UniProt

1 Sequence
Protein Ontology

PR:000031119 protein ITPRID1

(term hierarchy)
InterPro Domains

IPR029325 ITPR-interacting domain

IPR043444 Protein TESPA1-like

IPR029326 Sperm-specific antigen 2, C-terminal

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All nucleic 7

cDNA 7

Microarray probesets 1

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MGI:6192112

Summaries

All 20

Gene Ontology 1

Phenotypes 4
Earliest

J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Latest

J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

TSS for Itprid1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr56676	Chr6:55813863-55813885 (+)	-6 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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