About   Help   FAQ
Igkv4-86 Gene Detail
Summary
  • Symbol
    Igkv4-86
  • Name
    immunoglobulin kappa variable 4-86
  • Synonyms
    LOC243451
  • Feature Type
    gene segment
  • IDs
    MGI:2685305
    NCBI Gene: 243451
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:68887395-68887922 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 31.33 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    232 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685305
 gene segment Chr6:68887395-68887957 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0000132
 gene segment Chr6:66235477-66236039 (-)
AKR/J MGP_AKRJ_G0000134
 gene segment Chr6:68107171-68107733 (-)
BALB/cJ MGP_BALBcJ_G0000127
 gene segment Chr6:66543281-66543843 (-)
C3H/HeJ MGP_C3HHeJ_G0000124
 gene segment Chr6:115959010-115959572 (+)
C57BL/6NJ MGP_C57BL6NJ_G0000179
 gene segment Chr6:70850441-70851003 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0000139
 gene segment Chr6:69083365-69083897 (-)
CBA/J MGP_CBAJ_G0000132
 gene segment Chr6:73626355-73626917 (-)
DBA/2J MGP_DBA2J_G0000127
 gene segment Chr6:65832033-65832595 (-)
FVB/NJ MGP_FVBNJ_G0000124
 gene segment Chr6:65280090-65280652 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0000136
 gene segment Chr6:77382762-77383324 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000164
 gene segment Chr6:68284298-68284860 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 243451 NCBI Gene Model | MGI Sequence Detail 528 C57BL/6J ±  kb
transcript DQ372755 GenBank | ENA | DDBJ | MGI Sequence Detail 447 CBA/J  
polypeptide A0A0G2JGE7 UniProt | EBI | MGI Sequence Detail 114 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003599 Immunoglobulin subtype
    IPR050150 Immunoglobulin Variable Light Chain
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 7
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory