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A130030D18Rik Gene Detail
Summary
  • Symbol
    A130030D18Rik
  • Name
    RIKEN cDNA A130030D18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2685404
    NCBI Gene: 228116
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:82205716-82222546 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 49.08 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    522 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685404
 lncRNA gene Chr2:82205702-82222546 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005955
 lincRNA gene Chr2:83032382-83051952 (-)
A/J MGP_AJ_G0005948
 lincRNA gene Chr2:79816243-79833428 (-)
AKR/J MGP_AKRJ_G0005923
 lincRNA gene Chr2:81911831-81928562 (-)
BALB/cJ MGP_BALBcJ_G0005926
 lincRNA gene Chr2:79976982-79993507 (-)
C3H/HeJ MGP_C3HHeJ_G0005874
 lincRNA gene Chr2:82193658-82209777 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006087
 lincRNA gene Chr2:85528483-85549671 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0005810
 lincRNA gene Chr2:82625114-82642740 (-)
CBA/J MGP_CBAJ_G0005859
 lincRNA gene Chr2:88633656-88655777 (-)
DBA/2J MGP_DBA2J_G0005880
 lincRNA gene Chr2:79383740-79401239 (-)
FVB/NJ MGP_FVBNJ_G0005905
 lincRNA gene Chr2:78652998-78669850 (-)
LP/J MGP_LPJ_G0005959
 lincRNA gene Chr2:82936046-82953833 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005892
 lincRNA gene Chr2:90748038-90767120 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006084
 lincRNA gene Chr2:82078174-82095138 (-)
PWK/PhJ MGP_PWKPhJ_G0005759
 lincRNA gene Chr2:79270664-79289371 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005670
 lincRNA gene Chr2:82279658-82298561 (-)
WSB/EiJ MGP_WSBEiJ_G0005863
 lincRNA gene Chr2:82761139-82779543 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087061 Ensembl Gene Model | MGI Sequence Detail 16831 C57BL/6J ±  kb
transcript ENSMUST00000128608 Ensembl | MGI Sequence Detail 654 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 14
    Phenotypes 5
  • Earliest
    J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory