Gm567 Gene Detail

Summary

• Symbol
  Gm567
• Name
  predicted gene 567
• Synonyms
  LOC229861

• Feature Type
  lncRNA gene
• IDs
  MGI:2685413
  NCBI Gene: 229861
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:136995400-137006469 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  542 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2685413	lncRNA gene	Chr3:136995378-137006469 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006324	lincRNA gene	Chr3:140284409-140301927 (+)
A/J	MGP_AJ_G0006317	lincRNA gene	Chr3:135369005-135379911 (+)
AKR/J	MGP_AKRJ_G0006292	lincRNA gene	Chr3:138936601-138949443 (+)
BALB/cJ	MGP_BALBcJ_G0006291	lincRNA gene	Chr3:135180333-135194686 (+)
C3H/HeJ	MGP_C3HHeJ_G0006242	lincRNA gene	Chr3:139265052-139275884 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006456	lincRNA gene	Chr3:145153167-145169088 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005751	lincRNA gene	Chr3:130482770-130492752 (+)
CAST/EiJ	MGP_CASTEiJ_G0006176	lincRNA gene	Chr3:139034058-139044724 (+)
CBA/J	MGP_CBAJ_G0006225	lincRNA gene	Chr3:150090056-150103234 (+)
DBA/2J	MGP_DBA2J_G0006246	lincRNA gene	Chr3:134473099-134484378 (+)
FVB/NJ	MGP_FVBNJ_G0006268	lincRNA gene	Chr3:131938541-131949329 (+)
LP/J	MGP_LPJ_G0006328	lincRNA gene	Chr3:141708207-141718990 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006258	lincRNA gene	Chr3:158204347-158219340 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006462	lincRNA gene	Chr3:138473941-138484897 (+)
PWK/PhJ	MGP_PWKPhJ_G0006113	lincRNA gene	Chr3:134234144-134245797 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006026	lincRNA gene	Chr3:136558999-136573690 (+)
WSB/EiJ	MGP_WSBEiJ_G0006223	lincRNA gene	Chr3:139292333-139304384 (+)

Homology

• Gene Tree
  Gm567
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm567
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000104610 (Evidence)
• NCBI Gene
  229861

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104610	Ensembl Gene Model | MGI Sequence Detail	11070	C57BL/6J
transcript	ENSMUST00000197127	Ensembl | MGI Sequence Detail	469	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 11

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm567:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31896	Chr3:136993653-136993658 (+)	-1,744 bp