Gm650 Pseudogene Detail

Summary

• Symbol
  Gm650
• Name
  predicted pseudogene 650
• Synonyms
  LOC270667

• Feature Type
  pseudogene
• IDs
  MGI:2685496
  NCBI Gene: 667383
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:154087195-154088745 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 72.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2685496	pseudogene	ChrX:154087195-154088745 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014947	pseudogene	ChrX:153199664-153201214 (-)
A/J	MGP_AJ_G0014940	pseudogene	ChrX:152472653-152474203 (-)
AKR/J	MGP_AKRJ_G0014881	pseudogene	ChrX:157291416-157292966 (-)
BALB/cJ	MGP_BALBcJ_G0014894	pseudogene	ChrX:150582153-150583703 (-)
C3H/HeJ	MGP_C3HHeJ_G0014732	pseudogene	ChrX:153522334-153523884 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015380	pseudogene	ChrX:157658512-157660062 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013007	pseudogene	ChrX:144048237-144049781 (-)
CAST/EiJ	MGP_CASTEiJ_G0014340	pseudogene	ChrX:132692087-132693637 (-)
CBA/J	MGP_CBAJ_G0014719	pseudogene	ChrX:162156045-162157595 (-)
DBA/2J	MGP_DBA2J_G0014801	pseudogene	ChrX:151473433-151474971 (-)
FVB/NJ	MGP_FVBNJ_G0014783	pseudogene	ChrX:150587800-150589350 (-)
LP/J	MGP_LPJ_G0014900	pseudogene	ChrX:154292948-154294498 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014827	pseudogene	ChrX:170506006-170507556 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015365	pseudogene	ChrX:152766819-152768369 (-)
PWK/PhJ	MGP_PWKPhJ_G0014133	pseudogene	ChrX:129677182-129678716 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013921	pseudogene	ChrX:133140611-133142161 (-)
WSB/EiJ	MGP_WSBEiJ_G0014420	pseudogene	ChrX:150767836-150769386 (-)

Homology

• Gene Tree
  Gm650
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000052157 (Evidence)
• NCBI Gene
  667383

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000052157	Ensembl Gene Model | MGI Sequence Detail	1551	C57BL/6J
transcript	ENSMUST00000144428	Ensembl | MGI Sequence Detail	1551	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;