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Cyb5d1 Gene Detail
Summary
  • Symbol
    Cyb5d1
  • Name
    cytochrome b5 domain containing 1
  • Synonyms
    LOC327951
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685586
    NCBI Gene: 327951
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:69282751-69286457 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 42.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    141 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685586
 protein coding gene Chr11:69281756-69287005 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018530
 protein coding gene Chr11:69820036-69824212 (-)
A/J MGP_AJ_G0018499
 protein coding gene Chr11:67192620-67197163 (-)
AKR/J MGP_AKRJ_G0018468
 protein coding gene Chr11:69200731-69207334 (-)
BALB/cJ MGP_BALBcJ_G0018470
 protein coding gene Chr11:67512674-67516164 (-)
C3H/HeJ MGP_C3HHeJ_G0018283
 protein coding gene Chr11:69221310-69225636 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018922
 protein coding gene Chr11:71934091-71938142 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016566
 protein coding gene Chr11:64121603-64126365 (-)
CAST/EiJ MGP_CASTEiJ_G0017416
 protein coding gene Chr11:26019391-26020369 (-)
CBA/J MGP_CBAJ_G0018257
 protein coding gene Chr11:75153871-75160427 (-)
DBA/2J MGP_DBA2J_G0018366
 protein coding gene Chr11:66785574-66787933 (-)
FVB/NJ MGP_FVBNJ_G0018356
 protein coding gene Chr11:66410188-66415021 (-)
LP/J MGP_LPJ_G0018436
 protein coding gene Chr11:70390382-70394323 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018379
 protein coding gene Chr11:75764280-75773225 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018963
 protein coding gene Chr11:69450722-69456530 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0017402
 protein coding gene Chr11:69276458-69278194 (-)
WSB/EiJ MGP_WSBEiJ_G0017893
 protein coding gene Chr11:69131775-69135691 (-)



Homology
more
  • Human Ortholog
    CYB5D1, cytochrome b5 domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CYB5D1, cytochrome b5 domain containing 1
  • Links
    NCBI Gene ID: 124637
    neXtProt AC: NX_Q6P9G0
    UniProt: Q6P9G0

  • Chr Location
    17p13.1; chr17:7857746-7862282 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    850
  • Tissues
    137
  • cDNA Data
    14
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000044795 Ensembl Gene Model | MGI Sequence Detail 3707 C57BL/6J ±  kb
    transcript ENSMUST00000051620 Ensembl | MGI Sequence Detail 753 Not Applicable  
    polypeptide ENSMUSP00000059709 Ensembl | MGI Sequence Detail 228 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    • Protein Ontology
      PR:000032348 cytochrome b5 domain-containing protein 1
      (term hierarchy)
    • InterPro Domains
      IPR052320 Cytochrome b5 domain-containing
      IPR001199 Cytochrome b5-like heme/steroid binding domain
      IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily
    Molecular
    Reagents
    less
    • All nucleic 14
      cDNA 14

      Microarray probesets 2
    References
    more
    • Summaries
      All 29
      Developmental Gene Expression 2
      Gene Ontology 3
      Phenotypes 9
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory