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Gm773 Gene Detail
Summary
  • Symbol
    Gm773
  • Name
    predicted gene 773
  • Synonyms
    LOC331416
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685619
    NCBI Gene: 331416
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:55235187-55258241 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 30.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    491 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685619
 protein coding gene ChrX:55235187-55258246 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0035714
 protein coding gene ChrX:51650259-51670040 (-)
AKR/J MGP_AKRJ_G0035635
 protein coding gene ChrX:52618527-52628779 (+)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0036230
 protein coding gene ChrX:52800224-52832479 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033082
 protein coding gene ChrX:50785089-50803039 (+)
CAST/EiJ MGP_CASTEiJ_G0034698
 protein coding gene ChrX:37481111-37509305 (+)
CBA/J MGP_CBAJ_G0035378
 protein coding gene ChrX:54352840-54376105 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0035482
 protein coding gene ChrX:50873682-50893441 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0035521
 protein coding gene ChrX:55897292-55923686 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0034238
 protein coding gene ChrX:38185955-38472850 (+)
WSB/EiJ MGP_WSBEiJ_G0034841
 protein coding gene ChrX:50656260-50685910 (+)



Homology
more
  • Human Ortholog
    SYCP3, synaptonemal complex protein 3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SYCP3, synaptonemal complex protein 3
  • Synonyms
    COR1, RPRGL4, SCP3, SPGF4
  • Links
    NCBI Gene ID: 50511
    neXtProt AC: NX_Q8IZU3
    UniProt: Q8IZU3

  • Chr Location
    12q23.2; chr12:101728648-101739472 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human SYCP3 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    3 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit reduced male fertility due to impaired penetration of zona pellucida.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    718
  • Tissues
    11
  • cDNA Data
    5
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000073177 Ensembl Gene Model | MGI Sequence Detail 23055 C57BL/6J ±  kb
    transcript ENSMUST00000101561 Ensembl | MGI Sequence Detail 951 Not Applicable  
    polypeptide ENSMUSP00000099097 Ensembl | MGI Sequence Detail 206 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    • InterPro Domains
      IPR051443 X-linked Lymphocyte-regulated/Synaptonemal Complex Protein 3
      IPR006888 XLR/SYCP3/FAM9 domain
    Molecular
    Reagents
    less
    • All nucleic 7
      cDNA 5
      Primer pair 2

      Microarray probesets 1
    References
    more
    • Summaries
      All 17
      Developmental Gene Expression 2
      Gene Ontology 3
      Phenotypes 3
    • Earliest
      J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
    • Latest
      J:308859 Akter MS, et al., CRISPR/Cas9-based genetic screen of SCNT-reprogramming resistant genes identifies critical genes for male germ cell development in mice. Sci Rep. 2021 Jul 29;11(1):15438
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory