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D830013O20Rik Gene Detail
Summary
  • Symbol
    D830013O20Rik
  • Name
    RIKEN cDNA D830013O20 gene
  • Synonyms
    LOC380765
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2685737
    NCBI Gene: 380765
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:73410849-73456337 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 30.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1441 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685737
 lncRNA gene Chr12:73410849-73456412 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019837
 protein coding gene Chr12:73260771-73268134 (-)
A/J MGP_AJ_G0019795
 protein coding gene Chr12:70521621-70529029 (-)
AKR/J MGP_AKRJ_G0019770
 protein coding gene Chr12:72658107-72665418 (-)
BALB/cJ MGP_BALBcJ_G0019775
 protein coding gene Chr12:70999678-71008412 (-)
C3H/HeJ MGP_C3HHeJ_G0019580
 protein coding gene Chr12:73091087-73099638 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020227
 protein coding gene Chr12:75543071-75551760 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017845
 protein coding gene Chr12:67962926-67970523 (-)
CAST/EiJ MGP_CASTEiJ_G0019132
 protein coding gene Chr12:67889455-67897082 (-)
CBA/J MGP_CBAJ_G0019550
 protein coding gene Chr12:78425479-78435299 (-)
DBA/2J MGP_DBA2J_G0019666
 protein coding gene Chr12:70416445-70424090 (-)
FVB/NJ MGP_FVBNJ_G0019653
 protein coding gene Chr12:69261539-69268887 (-)
LP/J MGP_LPJ_G0019738
 protein coding gene Chr12:73278861-73287482 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019692
 protein coding gene Chr12:81548999-81558231 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020262
 protein coding gene Chr12:72145560-72154012 (-)
PWK/PhJ MGP_PWKPhJ_G0018897
 protein coding gene Chr12:64732833-64740574 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018692
 protein coding gene Chr12:66568994-66576331 (-)
WSB/EiJ MGP_WSBEiJ_G0019183
 protein coding gene Chr12:72733365-72742183 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 380765 NCBI Gene Model | MGI Sequence Detail 45489 C57BL/6J ±  kb
transcript NR_046013 RefSeq | MGI Sequence Detail 689 C57BL/6  
polypeptide Q8C3I6 UniProt | EBI | MGI Sequence Detail 110 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Phenotypes 2
  • Earliest
    J:137511 Lin Q, et al., Mutagenesis of diploid mammalian genes by gene entrapment. Nucleic Acids Res. 2006;34(20):e139
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory