C030017K20Rik Gene Detail

Summary

• Symbol
  C030017K20Rik
• Name
  RIKEN cDNA C030017K20 gene
• Synonyms
  LOC381581

• Feature Type
  lncRNA gene
• IDs
  MGI:2686516
  NCBI Gene: 100503428
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:155536022-155550862 bp, + strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 86.17 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  525 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2686516	lncRNA gene	Chr4:155536022-155550862 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  12 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  6

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  100503428

Representative Sequences			Length	Strain/Species
transcript	BC113168	GenBank | ENA | DDBJ | MGI Sequence Detail	2364	Not Specified

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42