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4933427D06Rik Gene Detail
Summary
  • Symbol
    4933427D06Rik
  • Name
    RIKEN cDNA 4933427D06 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3026922
    NCBI Gene: 232217
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:89073092-89087013 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 39.79 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    501 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3026922
 lncRNA gene Chr6:89073092-89087021 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031018
 protein coding gene Chr6:90367837-90538574 (+)
A/J MGP_AJ_G0030984
 protein coding gene Chr6:87049007-87062902 (+)
AKR/J MGP_AKRJ_G0030915
 protein coding gene Chr6:89530736-89544416 (+)
BALB/cJ MGP_BALBcJ_G0030997
 protein coding gene Chr6:87032273-87046204 (+)
C3H/HeJ MGP_C3HHeJ_G0030713
 protein coding gene Chr6:94895299-94909526 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031454
 protein coding gene Chr6:92785513-92956164 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028635
 protein coding gene Chr6:85202391-85209460 (+)
CAST/EiJ MGP_CASTEiJ_G0030106
 protein coding gene Chr6:89651203-89666644 (+)
CBA/J MGP_CBAJ_G0030681
 protein coding gene Chr6:96469596-96483504 (+)
DBA/2J MGP_DBA2J_G0030837
 protein coding gene Chr6:86322606-86336448 (+)
FVB/NJ MGP_FVBNJ_G0030790
 protein coding gene Chr6:85375473-85535414 (+)
LP/J MGP_LPJ_G0030914
 protein coding gene Chr6:90404604-90566512 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030823
 protein coding gene Chr6:100454115-100621337 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031481
 protein coding gene Chr6:89242462-89411317 (+)
PWK/PhJ MGP_PWKPhJ_G0029821
 protein coding gene Chr6:85303944-85318381 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029649
 protein coding gene Chr6:88056311-88222321 (+)
WSB/EiJ MGP_WSBEiJ_G0030187
 protein coding gene Chr6:89845567-89860824 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    21
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055403 Ensembl Gene Model | MGI Sequence Detail 13922 C57BL/6J ±  kb
transcript ENSMUST00000068968 Ensembl | MGI Sequence Detail 2620 Not Applicable  
polypeptide Q4KMM7 UniProt | EBI | MGI Sequence Detail 203 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR031439 Proline-rich protein family 20
Molecular
Reagents
less
  • All nucleic 21
    cDNA 21

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Phenotypes 7
  • Earliest
    J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory