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Prkcz2 Pseudogene Detail
Summary
  • Symbol
    Prkcz2
  • Name
    protein kinase C, zeta 2
  • Synonyms
    LOC233024
  • Feature Type
    pseudogene
  • IDs
    MGI:3029152
    NCBI Gene: 404705
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:27582180-27583935 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 15.97 cM, cytoband A2-3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    135 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3029152
 pseudogene Chr7:27581824-27584046 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0013856
 pseudogene Chr7:25928888-25935200 (-)
AKR/J MGP_AKRJ_G0013803
 pseudogene Chr7:26643578-26645866 (-)
BALB/cJ MGP_BALBcJ_G0013835
 pseudogene Chr7:26153962-26156245 (-)
C3H/HeJ MGP_C3HHeJ_G0013658
 pseudogene Chr7:27016991-27019846 (-)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0013640
 pseudogene Chr7:28714753-28716458 (-)
DBA/2J MGP_DBA2J_G0013720
 pseudogene Chr7:25737124-25738848 (-)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0013733
 pseudogene Chr7:28256842-28259160 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    13
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000108314 Ensembl Gene Model | MGI Sequence Detail 1756 C57BL/6J ±  kb
transcript ENSMUST00000206136 Ensembl | MGI Sequence Detail 1756 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGI:3037697
References
more
  • Summaries
    All 6
    Gene Ontology 1
  • Earliest
    J:87877 Parkinson SJ, et al., Identification of PKCzetaII: an endogenous inhibitor of cell polarity. EMBO J. 2004 Jan 14;23(1):77-88
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory