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Or6d13 Gene Detail
Summary
  • Symbol
    Or6d13
  • Name
    olfactory receptor family 6 subfamily D member 13
  • Synonyms
    GA_x54KRFPKN04-58174409-58175392, MOR119-3, Olfr213
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030047
    NCBI Gene: 258020
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:116517416-116518399 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 53.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    157 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030047
 protein coding gene Chr6:116515417-116521253 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031170
 protein coding gene Chr6:119190164-119190745 (+)
A/J MGP_AJ_G0031139
 protein coding gene Chr6:114644885-114645892 (+)
AKR/J MGP_AKRJ_G0031070
 protein coding gene Chr6:117720938-117724513 (+)
BALB/cJ MGP_BALBcJ_G0031150
 protein coding gene Chr6:114448413-114449561 (+)
C3H/HeJ MGP_C3HHeJ_G0030558
 protein coding gene Chr6:66558063-66560709 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031609
 protein coding gene Chr6:122290581-122291816 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028773
 protein coding gene Chr6:111616596-111617719 (-)
CAST/EiJ MGP_CASTEiJ_G0030256
 protein coding gene Chr6:118114131-118115606 (+)
CBA/J MGP_CBAJ_G0030835
 protein coding gene Chr6:127094676-127097807 (+)
DBA/2J MGP_DBA2J_G0030990
 protein coding gene Chr6:113528997-113530259 (+)
FVB/NJ MGP_FVBNJ_G0030942
 protein coding gene Chr6:112726199-112727110 (+)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0031636
 protein coding gene Chr6:117728895-117749772 (+)
PWK/PhJ MGP_PWKPhJ_G0029973
 protein coding gene Chr6:112585009-112586075 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029801
 protein coding gene Chr6:116491598-116492803 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258020 NCBI Gene Model | MGI Sequence Detail 984 C57BL/6J ±  kb
transcript NM_001011801 RefSeq | MGI Sequence Detail 984 Not Specified  
polypeptide NP_001011801 RefSeq | MGI Sequence Detail 327 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
    IPR047132 Olfactory receptor subfamily 6C-like
Molecular
Reagents
less

  • Microarray probesets 1
Other
Accession IDs
less
MGI:7276866
References
more
  • Summaries
    All 11
    Gene Ontology 2
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory