Or51f23c-ps1 Pseudogene Detail

Summary

• Symbol
  Or51f23c-ps1
• Name
  olfactory receptor family 51 subfamily F member 23C, pseudogene 1
• Synonyms
  GA_x6K02T2PBJ9-5498153-5499103, MOR14-5, Olfr562-ps1

• Feature Type
  polymorphic pseudogene
  BioType Conflict
  
• IDs
  MGI:3030396
  NCBI Gene: 259090
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:102430685-102431635 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 54.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030396	polymorphic pseudogene	Chr7:102430685-102431635 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Or51f23c-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  10 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Or51f23c-ps1
• Find Mice (IMSR)
  9 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  10
• RefSeq
  3

• Ensembl
  ENSMUSG00000110122 (Evidence)
• NCBI Gene
  259090

Representative Sequences			Length	Strain/Species
genomic	259090	NCBI Gene Model | MGI Sequence Detail	951	C57BL/6J
transcript	NM_001429805	RefSeq | MGI Sequence Detail	951	Not Specified
polypeptide	NP_001416734	RefSeq | MGI Sequence Detail	316	Not Specified

Other
Accession IDs

MGI:7277196

References

• Summaries
  All 17

  Phenotypes 10
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42