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Or52r1c Gene Detail
Summary
  • Symbol
    Or52r1c
  • Name
    olfactory receptor family 52 subfamily R member 1C
  • Synonyms
    GA_x6K02T2PBJ9-5796876-5797820, MOR30-2, Olfr584
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030418
    NCBI Gene: 259056
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:102734727-102735686 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 54.85 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    159 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030418
 protein coding gene Chr7:102731092-102737522 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0032618
 protein coding gene Chr7:103473023-103473921 (+)
AKR/J MGP_AKRJ_G0032552
 protein coding gene Chr7:105933296-105934255 (+)
BALB/cJ MGP_BALBcJ_G0032629
 protein coding gene Chr7:103175710-103180076 (+)
C3H/HeJ MGP_C3HHeJ_G0032342
 protein coding gene Chr7:106309895-106311590 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033126
 protein coding gene Chr7:110168142-110169958 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0031671
 protein coding gene Chr7:97863094-97864319 (+)
CBA/J MGP_CBAJ_G0032308
 protein coding gene Chr7:114040796-114041699 (+)
DBA/2J MGP_DBA2J_G0032459
 protein coding gene Chr7:101734072-101737924 (+)
FVB/NJ MGP_FVBNJ_G0032415
 protein coding gene Chr7:101480546-101481505 (+)
LP/J MGP_LPJ_G0032551
 protein coding gene Chr7:107499096-107500054 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032452
 protein coding gene Chr7:115289211-115290321 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033149
 protein coding gene Chr7:105196185-105197126 (+)
PWK/PhJ MGP_PWKPhJ_G0031385
 protein coding gene Chr7:94814485-94817387 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031228
 protein coding gene Chr7:92471516-92472740 (+)
WSB/EiJ MGP_WSBEiJ_G0031785
 protein coding gene Chr7:105876054-105877803 (+)



Homology
more
  • Human Ortholog
    OR52R1, olfactory receptor family 52 subfamily R member 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR52R1, olfactory receptor family 52 subfamily R member 1
  • Synonyms
    OR11-22
  • Links
    NCBI Gene ID: 119695
    neXtProt AC: NX_Q8NGF1
    UniProt: Q8NGF1

  • Chr Location
    11p15.4
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 259056 NCBI Gene Model | MGI Sequence Detail 960 C57BL/6J ±  kb
transcript NM_147054 RefSeq | MGI Sequence Detail 960 Not Specified  
polypeptide NP_667265 RefSeq | MGI Sequence Detail 319 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR050402 Human and Mouse Olfactory Receptor
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:7277220
References
more
  • Summaries
    All 22
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory