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Or52d13 Gene Detail
Summary
  • Symbol
    Or52d13
  • Name
    olfactory receptor family 52 subfamily D member 13
  • Synonyms
    EG546989, GA_x6K02T2PBJ9-6182881-6181898, Gm15121, MOR33-3P, Olfr607
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030441
    NCBI Gene: 546989
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:103109430-103113333 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 54.85 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    191 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030441
 protein coding gene Chr7:103104733-103113358 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040637
 pseudogene Chr7:106603170-106604136 (+)
A/J MGP_AJ_G0040635
 pseudogene Chr7:103870037-103871003 (+)
AKR/J MGP_AKRJ_G0040567
 pseudogene Chr7:106352813-106353779 (+)
BALB/cJ MGP_BALBcJ_G0040626
 pseudogene Chr7:103602434-103603400 (+)
C3H/HeJ MGP_C3HHeJ_G0040264
 pseudogene Chr7:106719421-106720387 (+)
C57BL/6NJ MGP_C57BL6NJ_G0041321
 pseudogene Chr7:110588537-110589503 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0037467
 pseudogene Chr7:106020425-106021391 (+)
CAST/EiJ MGP_CASTEiJ_G0039309
 pseudogene Chr7:98266724-98267690 (+)
CBA/J MGP_CBAJ_G0040231
 pseudogene Chr7:114490311-114491277 (+)
DBA/2J MGP_DBA2J_G0040444
 pseudogene Chr7:102178391-102179357 (+)
FVB/NJ MGP_FVBNJ_G0040373
 pseudogene Chr7:101911731-101912697 (+)
LP/J MGP_LPJ_G0040481
 pseudogene Chr7:107915789-107916755 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0040362
 pseudogene Chr7:115718379-115719345 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0041374
 pseudogene Chr7:105577785-105578751 (+)
PWK/PhJ MGP_PWKPhJ_G0038969
 pseudogene Chr7:95225457-95226423 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038676
 pseudogene Chr7:92865179-92866145 (+)
WSB/EiJ MGP_WSBEiJ_G0039560
 pseudogene Chr7:106256311-106257277 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 546989 NCBI Gene Model | MGI Sequence Detail 3904 C57BL/6J ±  kb
transcript NM_001370895 RefSeq | MGI Sequence Detail 984 C57BL/6  
polypeptide NP_001357824 RefSeq | MGI Sequence Detail 327 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR050402 Human and Mouse Olfactory Receptor
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
Other
Accession IDs
less
MGI:3643880, MGI:3705813, MGI:7277245
References
more
  • Summaries
    All 25
    Gene Ontology 2
    Phenotypes 9
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory