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Or56a4 Gene Detail
Summary
  • Symbol
    Or56a4
  • Name
    olfactory receptor family 56 subfamily A member 4
  • Synonyms
    GA_x6K02T2PBJ9-7786441-7785503, MOR40-8P, Olfr684
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030518
    NCBI Gene: 244187
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:104805949-104806887 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 55.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    150 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030518
 protein coding gene Chr7:104803899-104812860 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0032720
 protein coding gene Chr7:105536167-105537093 (-)
AKR/J MGP_AKRJ_G0032653
 protein coding gene Chr7:108320253-108321298 (-)
BALB/cJ MGP_BALBcJ_G0032727
 protein coding gene Chr7:105299893-105300922 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0033231
 protein coding gene Chr7:112701733-112703252 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030218
 protein coding gene Chr7:107607798-107608902 (-)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0032563
 protein coding gene Chr7:103829544-103830567 (-)
FVB/NJ MGP_FVBNJ_G0032516
 protein coding gene Chr7:103639773-103641222 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0032547
 protein coding gene Chr7:118042887-118043974 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033252
 protein coding gene Chr7:107386338-107387276 (-)
PWK/PhJ MGP_PWKPhJ_G0031479
 protein coding gene Chr7:96768325-96769629 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    OR56A4, olfactory receptor family 56 subfamily A member 4
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR56A4, olfactory receptor family 56 subfamily A member 4
  • Synonyms
    OR11-49
  • Links
    NCBI Gene ID: 120793
    neXtProt AC: NX_Q8NGH8
    UniProt: Q8NGH8

  • Chr Location
    11p15.4
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 244187 NCBI Gene Model | MGI Sequence Detail 939 C57BL/6J ±  kb
transcript NM_207249 RefSeq | MGI Sequence Detail 939 Not Specified  
polypeptide NP_997132 RefSeq | MGI Sequence Detail 312 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR050402 Human and Mouse Olfactory Receptor
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
Other
Accession IDs
less
MGI:7277328
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory