Or2h2b-ps1 Pseudogene Detail

Summary

• Symbol
  Or2h2b-ps1
• Name
  olfactory receptor family 2 subfamily H member 2B, pseudogene 1
• Synonyms
  GA_x6K02T2PSCP-1611898-1610960, MOR256-38, Olfr753-ps1

• Feature Type
  polymorphic pseudogene
  BioType Conflict
  
• IDs
  MGI:3030587
  NCBI Gene: 258052
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:37480602-37481537 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 19.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030587	polymorphic pseudogene	Chr17:37479204-37496621 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040187	pseudogene	Chr17:37549687-37550533 (-)
A/J	MGP_AJ_G0040173	pseudogene	Chr17:36347425-36348271 (-)
AKR/J	MGP_AKRJ_G0040104	pseudogene	Chr17:36794049-36794895 (-)
BALB/cJ	MGP_BALBcJ_G0040165	pseudogene	Chr17:36589924-36590770 (-)
C3H/HeJ	MGP_C3HHeJ_G0039810	pseudogene	Chr17:37313151-37313997 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040760	pseudogene	Chr17:39087212-39088095 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038898	pseudogene	Chr17:37430703-37431549 (-)
CBA/J	MGP_CBAJ_G0039778	pseudogene	Chr17:40677803-40678649 (-)
DBA/2J	MGP_DBA2J_G0039974	pseudogene	Chr17:35735876-35736722 (-)
FVB/NJ	MGP_FVBNJ_G0039934	pseudogene	Chr17:35292266-35293164 (-)
LP/J	MGP_LPJ_G0040015	pseudogene	Chr17:38077499-38078345 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039925	pseudogene	Chr17:39475820-39477010 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040856	pseudogene	Chr17:37128472-37162482 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0039119	pseudogene	Chr17:37454943-37455795 (-)

Homology

• Human Ortholog
  OR2H1, olfactory receptor family 2 subfamily H member 1

• Vertebrate Orthologs
  3

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  OR2H1, olfactory receptor family 2 subfamily H member 1
  
• Synonyms
  6M1-16, dJ994E9.4, HS6M1-16, OLFR42A-9004-14, OLFR42A-9004.14/9026.2, OR2H6, OR2H8, OR6-2
• Links
  HGNC:8252

  NCBI Gene ID: 26716

  neXtProt AC: NX_Q9GZK4

  UniProt: Q9GZK4

  
  
• Chr Location
  6p22.1; chr6:29457155-29464328 (+)  GRCh38

---

• Human Ortholog
  OR2H2, olfactory receptor family 2 subfamily H member 2
  
• Synonyms
  dJ271M21.2, FAT11, hs6M1-12, OLFR2, OLFR42B, OR2H3
• Links
  HGNC:8253

  NCBI Gene ID: 7932

  neXtProt AC: NX_O95918

  UniProt: O95918

  
  
• Chr Location
  6p22.1

---

• MGI Vertebrate Homology
  Or2h2b-ps1 stringent orthology
  2 human;1 mouse;1 rat
  
• HCOP
  vertebrate homology predictions: OR2H1, OR2H2
• Gene Tree
  Or2h2b-ps1
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  3

• Ensembl
  ENSMUSG00000090556 (Evidence)
• NCBI Gene
  258052

Representative Sequences			Length	Strain/Species
genomic	258052	NCBI Gene Model | MGI Sequence Detail	936	C57BL/6J
transcript	NR_190743	RefSeq | MGI Sequence Detail	939	C57BL/6
polypeptide	NP_001416480	RefSeq | MGI Sequence Detail	312	Not Specified

Other
Accession IDs

MGI:7277399

References

• Summaries
  All 7
• Earliest
  J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42