Or11a3-ps1 Pseudogene Detail

Summary

• Symbol
  Or11a3-ps1
• Name
  olfactory receptor family 11 subfamily A member 3, pseudogene 1
• Synonyms
  GA_x6K02T2PSCP-1717297-1717934, MOR121-3P, Olfr755-ps1

• Feature Type
  pseudogene
• IDs
  MGI:3030589
  NCBI Gene: 258049
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:37588219-37588978 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 19.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030589	pseudogene	Chr17:37587539-37588996 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040189	pseudogene	Chr17:37654578-37656035 (+)
A/J	MGP_AJ_G0040175	pseudogene	Chr17:36508401-36509858 (+)
AKR/J	MGP_AKRJ_G0040106	pseudogene	Chr17:36911077-36912533 (+)
BALB/cJ	MGP_BALBcJ_G0040167	pseudogene	Chr17:36721062-36722519 (+)
C3H/HeJ	MGP_C3HHeJ_G0039812	pseudogene	Chr17:37459807-37461263 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040762	pseudogene	Chr17:39293173-39294630 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038899	pseudogene	Chr17:37550388-37551842 (+)
CBA/J	MGP_CBAJ_G0039780	pseudogene	Chr17:40840850-40842306 (+)
DBA/2J	MGP_DBA2J_G0039976	pseudogene	Chr17:35870026-35871483 (+)
FVB/NJ	MGP_FVBNJ_G0039936	pseudogene	Chr17:35481777-35483234 (+)
LP/J	MGP_LPJ_G0040017	pseudogene	Chr17:38216023-38217480 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039927	pseudogene	Chr17:39604347-39605804 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040858	pseudogene	Chr17:37279108-37280565 (+)
PWK/PhJ	MGP_PWKPhJ_G0038589	pseudogene	Chr17:34616691-34618145 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038289	pseudogene	Chr17:35340611-35342065 (+)
WSB/EiJ	MGP_WSBEiJ_G0039121	pseudogene	Chr17:37624737-37626194 (+)

Homology

• Gene Tree
  Or11a3-ps1
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000092556 (Evidence)
• NCBI Gene
  258049

Representative Sequences			Length	Strain/Species
genomic	258049	NCBI Gene Model | MGI Sequence Detail	760	C57BL/6J

Other
Accession IDs

MGI:7277401

References

• Summaries
  All 7
• Earliest
  J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42

TSS for Or11a3-ps1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr144584	Chr17:37586946-37586985 (+)	-1,253 bp