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Or8aa1-ps1 Pseudogene Detail
Summary
  • Symbol
    Or8aa1-ps1
  • Name
    olfactory receptor family 8 subfamily AA member 1, pseudogene 1
  • Synonyms
    EG257825, GA_x6K02T2Q125-48014324-48014061, Olfr1078-ps1
  • Feature Type
    pseudogene
  • IDs
    MGI:3030912
    NCBI Gene: 404471
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:86359235-86360771 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 49.83 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    140 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030912
 pseudogene Chr2:86359133-86360771 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040246
 pseudogene Chr2:87456648-87458184 (-)
A/J MGP_AJ_G0040227
 pseudogene Chr2:83931615-83933151 (-)
AKR/J MGP_AKRJ_G0040161
 pseudogene Chr2:86213139-86214675 (-)
BALB/cJ MGP_BALBcJ_G0040227
 pseudogene Chr2:84132856-84134392 (-)
C3H/HeJ MGP_C3HHeJ_G0039865
 pseudogene Chr2:86421455-86422991 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040817
 pseudogene Chr2:90276355-90277891 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037255
 pseudogene Chr2:80860391-80861937 (-)
CAST/EiJ MGP_CASTEiJ_G0038955
 pseudogene Chr2:86977678-86979214 (-)
CBA/J MGP_CBAJ_G0039835
 pseudogene Chr2:93309773-93311309 (-)
DBA/2J MGP_DBA2J_G0040027
 pseudogene Chr2:83519708-83521244 (-)
FVB/NJ MGP_FVBNJ_G0039985
 pseudogene Chr2:82668697-82670233 (-)
LP/J MGP_LPJ_G0040075
 pseudogene Chr2:87401532-87403068 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039982
 pseudogene Chr2:95859065-95860601 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040917
 pseudogene Chr2:86423611-86425147 (-)
PWK/PhJ MGP_PWKPhJ_G0038645
 pseudogene Chr2:83439592-83441129 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038341
 pseudogene Chr2:86411945-86413468 (-)
WSB/EiJ MGP_WSBEiJ_G0039173
 pseudogene Chr2:87079073-87080606 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080924 Ensembl Gene Model | MGI Sequence Detail 1537 C57BL/6J ±  kb
transcript ENSMUST00000117978 Ensembl | MGI Sequence Detail 632 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3645031, MGI:3709623, MGI:7276343
References
more
  • Summaries
    All 13
    Phenotypes 5
  • Earliest
    J:88213 Young JM, et al., Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Genome Biol. 2003;4(11):R71
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory