Or8k36 Pseudogene Detail

Summary

• Symbol
  Or8k36
• Name
  olfactory receptor family 8 subfamily K member 36
• Synonyms
  GA_x6K02T2Q125-48092599-48091658, MOR191-3, Olfr1083-ps, Or8k36-ps1

• Feature Type
  polymorphic pseudogene
  BioType Conflict
  
• IDs
  MGI:3030917
  NCBI Gene: 404326
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:86436971-86437913 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 49.85 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030917	polymorphic pseudogene	Chr2:86436971-86437913 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040248	pseudogene	Chr2:87573570-87574511 (-)
A/J	MGP_AJ_G0040229	pseudogene	Chr2:84026685-84027626 (-)
AKR/J	MGP_AKRJ_G0040162	pseudogene	Chr2:86346050-86349341 (-)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0039867	pseudogene	Chr2:86538967-86545268 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0039984	pseudogene	Chr2:96065494-96066435 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040919	pseudogene	Chr2:86531440-86533301 (-)
PWK/PhJ	MGP_PWKPhJ_G0038646	pseudogene	Chr2:83564529-83565575 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038342	pseudogene	Chr2:86506099-86506977 (-)
WSB/EiJ	MGP_WSBEiJ_G0039174	pseudogene	Chr2:87118619-87119563 (-)

Homology

• Gene Tree
  Or8k36
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Targeted
  2
• Genomic Mutations
  3 involving Or8k36
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  3

• Ensembl
  ENSMUSG00000068824 (Evidence)
• NCBI Gene
  404326

Representative Sequences			Length	Strain/Species
genomic	404326	NCBI Gene Model | MGI Sequence Detail	943	C57BL/6J
transcript	NR_190775	RefSeq | MGI Sequence Detail	943	C57BL/6
polypeptide	NP_001416646	RefSeq | MGI Sequence Detail	313	Not Specified

Molecular
Reagents

• 
  

  Microarray probesets 1

Other
Accession IDs

MGI:7276349, MGI:7785268

References

• Summaries
  All 14

  Phenotypes 5
• Earliest
  J:88213 Young JM, et al., Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Genome Biol. 2003;4(11):R71
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42