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Or1ad6 Gene Detail
Summary
  • Symbol
    Or1ad6
  • Name
    olfactory receptor family 1 subfamily AD member 6
  • Synonyms
    GA_x6K02T2QP88-4469162-4468215, MOR129-2, Olfr1378
  • Feature Type
    protein coding gene
  • IDs
    MGI:3031212
    NCBI Gene: 258912
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:50859847-50860794 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 30.96 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    164 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3031212
 protein coding gene Chr11:50857357-50863940 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018260
 protein coding gene Chr11:50169674-50170621 (+)
A/J MGP_AJ_G0018228
 protein coding gene Chr11:48253671-48254616 (+)
AKR/J MGP_AKRJ_G0018198
 protein coding gene Chr11:49786650-49787597 (+)
BALB/cJ MGP_BALBcJ_G0018198
 protein coding gene Chr11:48547875-48548822 (+)
C3H/HeJ MGP_C3HHeJ_G0018011
 protein coding gene Chr11:49774281-49775228 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018649
 protein coding gene Chr11:51642196-51643496 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016302
 protein coding gene Chr11:45855116-45856063 (+)
CAST/EiJ MGP_CASTEiJ_G0017573
 protein coding gene Chr11:49786246-49789155 (+)
CBA/J MGP_CBAJ_G0017986
 protein coding gene Chr11:54035115-54036062 (+)
DBA/2J MGP_DBA2J_G0018093
 protein coding gene Chr11:48041096-48042027 (+)
FVB/NJ MGP_FVBNJ_G0018087
 protein coding gene Chr11:47678430-47679884 (+)
LP/J MGP_LPJ_G0018168
 protein coding gene Chr11:50543121-50546654 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018112
 protein coding gene Chr11:55535887-55536834 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018693
 protein coding gene Chr11:49880744-49884428 (+)
PWK/PhJ MGP_PWKPhJ_G0017351
 protein coding gene Chr11:48445820-48446771 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017146
 protein coding gene Chr11:49601633-49602580 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    OR1C1, olfactory receptor family 1 subfamily C member 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR1C1, olfactory receptor family 1 subfamily C member 1
  • Synonyms
    HSTPCR27, OR1-42, OR1.5.10, ORL211, TPCR27
  • Links
    NCBI Gene ID: 26188
    neXtProt AC: NX_Q15619
    UniProt: Q15619

  • Chr Location
    1q44; chr1:247754846-247760556 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258912 NCBI Gene Model | MGI Sequence Detail 948 C57BL/6J ±  kb
transcript NM_146910 RefSeq | MGI Sequence Detail 948 Not Specified  
polypeptide NP_667121 RefSeq | MGI Sequence Detail 315 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:7276658
References
more
  • Summaries
    All 15
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory