About   Help   FAQ
Or4a80 Gene Detail
Summary
  • Symbol
    Or4a80
  • Name
    olfactory receptor family 4 subfamily A member 80
  • Synonyms
    GA_x6K02T2Q125-51193814-51192857, MOR231-18, MOR231-19P, MOR231-19P, Olfr1253, Olfr1253-ps1, Olfr1559-ps1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3031393
    NCBI Gene: 258370
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:89582214-89583170 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 50.12 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    98 from dbSNP Build 142
  • Strain Annotations
    10
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3031393
 protein coding gene Chr2:89579811-89587434 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026109
 protein coding gene Chr2:90949606-90950562 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0026528
 protein coding gene Chr2:94091786-94093134 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023920
 protein coding gene Chr2:83756252-83757208 (-)
CAST/EiJ MGP_CASTEiJ_G0025295
 protein coding gene Chr2:90577543-90579302 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0026049
 protein coding gene Chr2:91113404-91114528 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0026585
 protein coding gene Chr2:89819231-89820187 (-)
PWK/PhJ MGP_PWKPhJ_G0025029
 protein coding gene Chr2:86839785-86841057 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024834
 protein coding gene Chr2:89573654-89574540 (-)
WSB/EiJ MGP_WSBEiJ_G0025363
 protein coding gene Chr2:90579180-90580136 (-)



Homology
more
  • Human Ortholog
    OR4A16, olfactory receptor family 4 subfamily A member 16
  • Vertebrate Orthologs
    29
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR4A16, olfactory receptor family 4 subfamily A member 16
  • Synonyms
    OR11-117, OR4A16Q
  • Links
    NCBI Gene ID: 81327
    neXtProt AC: NX_Q8NH70
    UniProt: Q8NH70

  • Chr Location
    11q11; chr11:55343201-55344187 (+)  GRCh38
  • Human Ortholog
    OR4A5, olfactory receptor family 4 subfamily A member 5
  • Synonyms
    OR11-111
  • Links
    NCBI Gene ID: 81318
    neXtProt AC: NX_Q8NH83
    UniProt: Q8NH83

  • Chr Location
    11q11; chr11:54706832-54707902 (+)  GRCh38
  • Human Ortholog
    OR4A8, olfactory receptor family 4 subfamily A member 8 (gene/pseudogene)
  • Synonyms
    OR4A8P
  • Links
    NCBI Gene ID: 81315
    UniProt: P0C604

  • Chr Location
    11q11; chr11:54682876-54683821 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258370 NCBI Gene Model | MGI Sequence Detail 957 C57BL/6J ±  kb
transcript NM_146373 RefSeq | MGI Sequence Detail 957 C57BL/6  
polypeptide NP_666485 RefSeq | MGI Sequence Detail 318 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR050427 Human Olfactory Receptors
    IPR000725 Olfactory receptor
Other
Accession IDs
less
MGI:3031087, MGI:7276527
References
more
  • Summaries
    All 18
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory