BB365896 Gene Detail

Summary

• Symbol
  BB365896
• Name
  expressed sequence BB365896

• Feature Type
  lncRNA gene
• IDs
  MGI:3034340
  NCBI Gene: 102638623
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:58942640-58979068 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 27.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1016 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3034340	lncRNA gene	Chr6:58942640-58979068 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004280	antisense lncRNA gene	Chr6:58605332-58642704 (+)
A/J	MGP_AJ_G0004258	antisense lncRNA gene	Chr6:56065474-56101896 (+)
AKR/J	MGP_AKRJ_G0004239	antisense lncRNA gene	Chr6:57907970-57950114 (+)
BALB/cJ	MGP_BALBcJ_G0004245	antisense lncRNA gene	Chr6:56356445-56392830 (+)
C3H/HeJ	MGP_C3HHeJ_G0004193	antisense lncRNA gene	Chr6:57886537-57922941 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004394	antisense lncRNA gene	Chr6:59886742-59923069 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003867	antisense lncRNA gene	Chr6:53075255-53112638 (+)
CAST/EiJ	MGP_CASTEiJ_G0004155	antisense lncRNA gene	Chr6:57546485-57588983 (+)
CBA/J	MGP_CBAJ_G0004187	antisense lncRNA gene	Chr6:62386752-62423181 (+)
DBA/2J	MGP_DBA2J_G0004203	antisense lncRNA gene	Chr6:55773095-55809529 (+)
FVB/NJ	MGP_FVBNJ_G0004218	antisense lncRNA gene	Chr6:55317487-55354510 (+)
LP/J	MGP_LPJ_G0004281	antisense lncRNA gene	Chr6:58526373-58563009 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004209	antisense lncRNA gene	Chr6:65042057-65081949 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004391	antisense lncRNA gene	Chr6:57772475-57809732 (+)
PWK/PhJ	MGP_PWKPhJ_G0004108	antisense lncRNA gene	Chr6:55520901-55557963 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004052	antisense lncRNA gene	Chr6:56975506-57014111 (+)
WSB/EiJ	MGP_WSBEiJ_G0004191	antisense lncRNA gene	Chr6:57964541-58000950 (+)

Homology

• Gene Tree
  BB365896
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000092323 (Evidence)
• NCBI Gene
  102638623

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092323	Ensembl Gene Model | MGI Sequence Detail	36429	C57BL/6J
transcript	ENSMUST00000173978	Ensembl | MGI Sequence Detail	3000	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;