BE691133 Gene Detail

Summary

• Symbol
  BE691133
• Name
  expressed sequence BE691133

• Feature Type
  lncRNA gene
• IDs
  MGI:3035105
  NCBI Gene: 100040558
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr4:137719429-137720597 bp, - strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3035105	lncRNA gene	Chr4:137719429-137720597 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving BE691133
• Find Mice (IMSR)
  1 strains or lines available

Expression

• cDNA Data
  2

Sequences &
Gene Models

• All Sequences
  3

• NCBI Gene
  100040558

Representative Sequences			Length	Strain/Species
transcript	AK132899	GenBank | ENA | DDBJ | MGI Sequence Detail	1171	C57BL/6J

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

TSS for BE691133:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr44155	Chr4:137722023-137722070 (-)	-1,450 bp
Tssr44154	Chr4:137720595-137720615 (-)	-8 bp