Gm1833 Pseudogene Detail

Summary

• Symbol
  Gm1833
• Name
  predicted gene 1833
• Synonyms
  LOC227393

• Feature Type
  pseudogene
• IDs
  MGI:3037691
  NCBI Gene: 227393
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:96573145-96573895 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 47.76 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  186 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3037691	pseudogene	Chr1:96573145-96574094 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010250	pseudogene	Chr1:98382683-98383433 (+)
A/J	MGP_AJ_G0010244	pseudogene	Chr1:94912462-94913326 (+)
AKR/J	MGP_AKRJ_G0010215	pseudogene	Chr1:97684008-97685836 (+)
BALB/cJ	MGP_BALBcJ_G0010220	pseudogene	Chr1:95085299-95086049 (+)
C3H/HeJ	MGP_C3HHeJ_G0010158	pseudogene	Chr1:97951712-97952462 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010490	pseudogene	Chr1:102288126-102288876 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0010127	pseudogene	Chr1:105619041-105619791 (+)
DBA/2J	MGP_DBA2J_G0010159	pseudogene	Chr1:94130313-94131063 (+)
FVB/NJ	MGP_FVBNJ_G0010177	pseudogene	Chr1:93152470-93153220 (+)
LP/J	MGP_LPJ_G0010238	pseudogene	Chr1:99650495-99651245 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010138	pseudogene	Chr1:109192127-109192877 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010455	pseudogene	Chr1:97685591-97686341 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010047	pseudogene	Chr1:97510746-97511496 (+)

Homology

• Gene Tree
  Gm1833
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm1833
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  2

• Ensembl
  ENSMUSG00000100362 (Evidence)
• NCBI Gene
  227393

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100362	Ensembl Gene Model | MGI Sequence Detail	751	C57BL/6J
transcript	ENSMUST00000191608	Ensembl | MGI Sequence Detail	682	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582