About   Help   FAQ
BC051226 Gene Detail
Summary
  • Symbol
    BC051226
  • Name
    cDNA sequence BC051226
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3039585
    NCBI Gene: 407803
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:34127156-34128152 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3039585
 lncRNA gene Chr17:34126150-34128341 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003391
 antisense lncRNA gene Chr17:33857594-33858729 (-)
A/J MGP_AJ_G0003368
 antisense lncRNA gene Chr17:32690740-32691875 (-)
AKR/J MGP_AKRJ_G0003351
 antisense lncRNA gene Chr17:33086388-33087523 (-)
BALB/cJ MGP_BALBcJ_G0003357
 antisense lncRNA gene Chr17:32863679-32864814 (-)
C3H/HeJ MGP_C3HHeJ_G0003309
 antisense lncRNA gene Chr17:33441824-33442959 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003486
 antisense lncRNA gene Chr17:27189431-27190566 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003013
 antisense lncRNA gene Chr17:30193106-30194235 (-)
CAST/EiJ MGP_CASTEiJ_G0003272
 antisense lncRNA gene Chr17:33512233-33513368 (-)
CBA/J MGP_CBAJ_G0003305
 antisense lncRNA gene Chr17:36539715-36540850 (-)
DBA/2J MGP_DBA2J_G0003312
 antisense lncRNA gene Chr17:32068162-32069297 (-)
FVB/NJ MGP_FVBNJ_G0003330
 antisense lncRNA gene Chr17:31927584-31928719 (-)
LP/J MGP_LPJ_G0003385
 antisense lncRNA gene Chr17:34131963-34133098 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003318
 antisense lncRNA gene Chr17:35592233-35593368 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003500
 antisense lncRNA gene Chr17:33410318-33411463 (-)
PWK/PhJ MGP_PWKPhJ_G0003231
 antisense lncRNA gene Chr17:30980968-30982103 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003175
 antisense lncRNA gene Chr17:31369661-31370799 (-)
WSB/EiJ MGP_WSBEiJ_G0003306
 antisense lncRNA gene Chr17:33452520-33453655 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    33
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 407803 NCBI Gene Model | MGI Sequence Detail 997 C57BL/6J ±  kb
transcript NR_045146 RefSeq | MGI Sequence Detail 843 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Phenotypes 4
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory