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A530013C23Rik Gene Detail
Summary
  • Symbol
    A530013C23Rik
  • Name
    RIKEN cDNA A530013C23 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3041178
    NCBI Gene: 329562
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:167532679-167539333 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 87.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    160 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041178
 lncRNA gene Chr2:167532597-167571092 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006076
 lincRNA gene Chr2:173461349-173500422 (+)
A/J MGP_AJ_G0006067
 lincRNA gene Chr2:166310387-166348169 (+)
AKR/J MGP_AKRJ_G0006043
 lincRNA gene Chr2:171268507-171308943 (+)
BALB/cJ MGP_BALBcJ_G0006043
 lincRNA gene Chr2:166661812-166700922 (+)
C3H/HeJ MGP_C3HHeJ_G0005993
 lincRNA gene Chr2:171637839-171678290 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006205
 lincRNA gene Chr2:178522210-178559699 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005529
 lincRNA gene Chr2:159614523-159653270 (+)
CAST/EiJ MGP_CASTEiJ_G0005930
 lincRNA gene Chr2:172105377-172144615 (+)
CBA/J MGP_CBAJ_G0005978
 lincRNA gene Chr2:185077362-185121745 (+)
DBA/2J MGP_DBA2J_G0005998
 lincRNA gene Chr2:165413511-165452258 (+)
FVB/NJ MGP_FVBNJ_G0006023
 lincRNA gene Chr2:163953687-163991568 (+)
LP/J MGP_LPJ_G0006080
 lincRNA gene Chr2:173473794-173514195 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006012
 lincRNA gene Chr2:188429096-188468204 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006207
 lincRNA gene Chr2:171199264-171238041 (+)
PWK/PhJ MGP_PWKPhJ_G0005876
 lincRNA gene Chr2:165089873-165130041 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005786
 lincRNA gene Chr2:170145765-170190798 (+)
WSB/EiJ MGP_WSBEiJ_G0005978
 lincRNA gene Chr2:172105230-172144350 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    760
  • Tissues
    10
  • cDNA Data
    5
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 329562 NCBI Gene Model | MGI Sequence Detail 6655 C57BL/6J ±  kb
transcript NR_015500 RefSeq | MGI Sequence Detail 2171 C57BL/6  
polypeptide Q8BS38 UniProt | EBI | MGI Sequence Detail 143 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 7
    Genomic 2
    cDNA 5
References
more
  • Summaries
    All 12
    Developmental Gene Expression 1
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory