About   Help   FAQ
A730036I17Rik Gene Detail
Summary
  • Symbol
    A730036I17Rik
  • Name
    RIKEN cDNA A730036I17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3041182
    NCBI Gene: 329513
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:129060889-129077524 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 62.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    663 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041182
 lncRNA gene Chr2:129060889-129077526 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006015
 lincRNA gene Chr2:132598239-132614787 (+)
A/J MGP_AJ_G0006008
 lincRNA gene Chr2:127225194-127241818 (+)
AKR/J MGP_AKRJ_G0005982
 lincRNA gene Chr2:130838576-130855396 (+)
BALB/cJ MGP_BALBcJ_G0005985
 lincRNA gene Chr2:127491857-127508462 (+)
C3H/HeJ MGP_C3HHeJ_G0005934
 lincRNA gene Chr2:131355003-131371608 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006145
 lincRNA gene Chr2:136750547-136767064 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005476
 lincRNA gene Chr2:122048495-122065704 (+)
CAST/EiJ MGP_CASTEiJ_G0005869
 lincRNA gene Chr2:131604769-131621407 (+)
CBA/J MGP_CBAJ_G0005918
 lincRNA gene Chr2:141808244-141824618 (+)
DBA/2J MGP_DBA2J_G0005939
 lincRNA gene Chr2:126614449-126631152 (+)
FVB/NJ MGP_FVBNJ_G0005964
 lincRNA gene Chr2:125264074-125280681 (+)
LP/J MGP_LPJ_G0006020
 lincRNA gene Chr2:132841553-132858885 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005951
 lincRNA gene Chr2:145705610-145722237 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006144
 lincRNA gene Chr2:130874683-130891663 (+)
PWK/PhJ MGP_PWKPhJ_G0005817
 lincRNA gene Chr2:126200325-126217246 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005728
 lincRNA gene Chr2:129996276-130013286 (+)
WSB/EiJ MGP_WSBEiJ_G0005921
 lincRNA gene Chr2:131796760-131813342 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    24
  • Chemically induced (other)
    1
  • Gene trapped
    22
  • Radiation induced
    1
  • Genomic Mutations
    2 involving A730036I17Rik
  • Find Mice (IMSR)
    14 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000056738 Ensembl Gene Model | MGI Sequence Detail 16636 C57BL/6J ±  kb
transcript ENSMUST00000143346 Ensembl | MGI Sequence Detail 3431 Not Applicable  
polypeptide Q8C959 UniProt | EBI | MGI Sequence Detail 158 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6
References
more
  • Summaries
    All 17
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory