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C130060C02Rik Gene Detail
Summary
  • Symbol
    C130060C02Rik
  • Name
    RIKEN cDNA C130060C02 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3041192
    NCBI Gene: 100502653
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:15962439-15988060 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 10.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1213 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041192
 lncRNA gene Chr19:15962439-15988276 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005816
 lincRNA gene Chr19:13686545-13712821 (+)
A/J MGP_AJ_G0005807
 lincRNA gene Chr19:12895255-12924608 (+)
AKR/J MGP_AKRJ_G0005783
 lincRNA gene Chr19:13437212-13462879 (+)
BALB/cJ MGP_BALBcJ_G0005786
 lincRNA gene Chr19:12935990-12964739 (+)
C3H/HeJ MGP_C3HHeJ_G0005734
 lincRNA gene Chr19:13377761-13404905 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005946
 lincRNA gene Chr19:14249145-14274881 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005287
 lincRNA gene Chr19:13359268-13386273 (+)
CAST/EiJ MGP_CASTEiJ_G0005672
 lincRNA gene Chr19:12946936-12974843 (+)
CBA/J MGP_CBAJ_G0005719
 lincRNA gene Chr19:14671930-14699601 (+)
DBA/2J MGP_DBA2J_G0005739
 lincRNA gene Chr19:12941618-12967525 (+)
FVB/NJ MGP_FVBNJ_G0005766
 lincRNA gene Chr19:12870188-12895912 (+)
LP/J MGP_LPJ_G0005820
 lincRNA gene Chr19:13688343-13719888 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005752
 lincRNA gene Chr19:14627901-14654921 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005944
 lincRNA gene Chr19:13348798-13377612 (+)
PWK/PhJ MGP_PWKPhJ_G0005619
 lincRNA gene Chr19:12475095-12501069 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005534
 lincRNA gene Chr19:12646916-12686035 (+)
WSB/EiJ MGP_WSBEiJ_G0005726
 lincRNA gene Chr19:13367188-13393820 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097557 Ensembl Gene Model | MGI Sequence Detail 25622 C57BL/6J ±  kb
transcript ENSMUST00000181731 Ensembl | MGI Sequence Detail 938 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 12
    Phenotypes 3
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory