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E130018O15Rik Gene Detail
Summary
  • Symbol
    E130018O15Rik
  • Name
    RIKEN cDNA E130018O15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3045238
    NCBI Gene: 442795
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:35536496-35545820 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 18.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    424 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045238
 lncRNA gene Chr5:35536496-35545820 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006612
 lincRNA gene Chr5:33650627-33659951 (-)
A/J MGP_AJ_G0006606
 lincRNA gene Chr5:32560813-32570133 (-)
AKR/J MGP_AKRJ_G0006576
 lincRNA gene Chr5:33807522-33816842 (-)
BALB/cJ MGP_BALBcJ_G0006581
 lincRNA gene Chr5:33081732-33091052 (-)
C3H/HeJ MGP_C3HHeJ_G0006528
 lincRNA gene Chr5:33833170-33842490 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006746
 lincRNA gene Chr5:35559276-35568600 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006012
 lincRNA gene Chr5:30323317-30333457 (-)
CAST/EiJ MGP_CASTEiJ_G0006452
 lincRNA gene Chr5:32918054-32927343 (-)
CBA/J MGP_CBAJ_G0006509
 lincRNA gene Chr5:36389864-36399184 (-)
DBA/2J MGP_DBA2J_G0006531
 lincRNA gene Chr5:32708096-32717416 (-)
FVB/NJ MGP_FVBNJ_G0006552
 lincRNA gene Chr5:32163241-32172561 (-)
LP/J MGP_LPJ_G0006613
 lincRNA gene Chr5:34083351-34092675 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006538
 lincRNA gene Chr5:37215747-37225063 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006750
 lincRNA gene Chr5:33315065-33324385 (-)
PWK/PhJ MGP_PWKPhJ_G0006390
 lincRNA gene Chr5:31869951-31879232 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006300
 lincRNA gene Chr5:32771852-32780889 (-)
WSB/EiJ MGP_WSBEiJ_G0006503
 lincRNA gene Chr5:33373823-33383147 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    22 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (ENU)
    1
  • Chemically induced (other)
    2
  • Radiation induced
    4
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    8 involving E130018O15Rik
  • Find Mice (IMSR)
    3 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 442795 NCBI Gene Model | MGI Sequence Detail 9325 C57BL/6J ±  kb
transcript NR_152157 RefSeq | MGI Sequence Detail 3776 C57BL/6  
polypeptide Q8BPS2 UniProt | EBI | MGI Sequence Detail 174 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 33
    Diseases 1
    Phenotypes 22
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory