About   Help   FAQ
Stard9 Gene Detail
Summary
  • Symbol
    Stard9
  • Name
    StAR related lipid transfer domain containing 9
  • Synonyms
    4831403C07Rik, E230025N21Rik, Kif16a, mKIAA1300, N-3 kinesin
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045258
    NCBI Gene: 668880
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:120459602-120562376 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 60.37 cM, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2277 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045258
 protein coding gene Chr2:120459567-120562376 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026372
 protein coding gene Chr2:123500175-123607025 (+)
A/J MGP_AJ_G0026333
 protein coding gene Chr2:118449485-118550280 (+)
AKR/J MGP_AKRJ_G0026312
 protein coding gene Chr2:121753783-121860091 (+)
BALB/cJ MGP_BALBcJ_G0026346
 protein coding gene Chr2:118686596-118789441 (+)
C3H/HeJ MGP_C3HHeJ_G0026092
 protein coding gene Chr2:122247745-122359701 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026793
 protein coding gene Chr2:127529270-127646519 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024173
 protein coding gene Chr2:113461255-113563937 (+)
CAST/EiJ MGP_CASTEiJ_G0025554
 protein coding gene Chr2:122549304-122662170 (+)
CBA/J MGP_CBAJ_G0026068
 protein coding gene Chr2:131997207-132110754 (+)
DBA/2J MGP_DBA2J_G0026207
 protein coding gene Chr2:117841839-117942298 (+)
FVB/NJ MGP_FVBNJ_G0026169
 protein coding gene Chr2:116673560-116774032 (+)
LP/J MGP_LPJ_G0026308
 protein coding gene Chr2:123766236-123870810 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026188
 protein coding gene Chr2:136300892-136409992 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026848
 protein coding gene Chr2:121885155-121990113 (+)
PWK/PhJ MGP_PWKPhJ_G0025290
 protein coding gene Chr2:117443404-117544169 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025089
 protein coding gene Chr2:121090118-121193453 (+)
WSB/EiJ MGP_WSBEiJ_G0025623
 protein coding gene Chr2:122717475-122822129 (+)



Homology
more
  • Human Ortholog
    STARD9, StAR related lipid transfer domain containing 9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    STARD9, StAR related lipid transfer domain containing 9
  • Synonyms
    KIF16A
  • Links
    NCBI Gene ID: 57519
    neXtProt AC: NX_Q9P2P6
    UniProt: Q9P2P6

  • Chr Location
    15q15.2; chr15:42575606-42720998 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 2 alleles in 2 genetic backgrounds
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit Purkinje cell degeneration associated with tremors, ataxia, loss of grip strength, and abnormal gait.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    21
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      67
    • RefSeq
      17
    • UniProt
      5
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000033705 Ensembl Gene Model | MGI Sequence Detail 102775 C57BL/6J ±  kb
    transcript ENSMUST00000180041 Ensembl | MGI Sequence Detail 15004 Not Applicable  
    polypeptide ENSMUSP00000136055 Ensembl | MGI Sequence Detail 4561 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 10
      cDNA 10

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:1098241, MGI:2444446
    References
    more
    • Summaries
      All 33
      Gene Ontology 5
      Phenotypes 9
    • Earliest
      J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory