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Sntn Gene Detail
Summary
  • Symbol
    Sntn
  • Name
    sentan, cilia apical structure protein
  • Synonyms
    A430083B19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045373
    NCBI Gene: 218739
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:8786615-8798887 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 6.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    396 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045373
 protein coding gene Chr14:8786615-8798887 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021002
 protein coding gene Chr14:6172670-6185219 (+)
A/J MGP_AJ_G0020950
 protein coding gene Chr14:6029241-6041515 (+)
AKR/J MGP_AKRJ_G0020927
 protein coding gene Chr14:6120022-6132292 (+)
BALB/cJ MGP_BALBcJ_G0020953
 protein coding gene Chr14:6026127-6038399 (+)
C3H/HeJ MGP_C3HHeJ_G0020737
 protein coding gene Chr14:6207987-6220203 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021386
 protein coding gene Chr14:6352489-6365108 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018955
 protein coding gene Chr14:6698205-6710643 (+)
CAST/EiJ MGP_CASTEiJ_G0020259
 protein coding gene Chr14:6218722-6230985 (+)
CBA/J MGP_CBAJ_G0020703
 protein coding gene Chr14:6565853-6578083 (+)
DBA/2J MGP_DBA2J_G0020826
 protein coding gene Chr14:5951573-5963817 (+)
FVB/NJ MGP_FVBNJ_G0020808
 protein coding gene Chr14:5891060-5903332 (+)
LP/J MGP_LPJ_G0020902
 protein coding gene Chr14:6162455-6179416 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020834
 protein coding gene Chr14:6621824-6634096 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021419
 protein coding gene Chr14:6080841-6093147 (+)
PWK/PhJ MGP_PWKPhJ_G0020011
 protein coding gene Chr14:5953552-5965841 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019831
 protein coding gene Chr14:6179070-6191274 (+)
WSB/EiJ MGP_WSBEiJ_G0020317
 protein coding gene Chr14:6126831-6138997 (+)



Homology
more
  • Human Ortholog
    SNTN, sentan, cilia apical structure protein
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNTN, sentan, cilia apical structure protein
  • Synonyms
    S100A1L, S100AL, sentan
  • Links
    NCBI Gene ID: 132203
    neXtProt AC: NX_A6NMZ2
    UniProt: A6NMZ2

  • Chr Location
    3p14.2; chr3:63652675-63679020 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    714
  • Tissues
    4
  • cDNA Data
    5
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 218739 NCBI Gene Model | MGI Sequence Detail 12273 C57BL/6J ±  kb
transcript NM_177624 RefSeq | MGI Sequence Detail 1240 C57BL/6  
polypeptide Q8C9X1 UniProt | EBI | MGI Sequence Detail 147 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory