AF357341 MGI Mouse Gene Detail - MGI:3510328

Sequence Map

Chr12:109647953-109648027 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3510328	snoRNA gene	Chr12:109647953-109648027 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038676	snoRNA gene	Chr12:111921797-111921871 (+)
A/J	MGP_AJ_G0038668	snoRNA gene	Chr12:107606149-107606223 (+)
AKR/J	MGP_AKRJ_G0038603	snoRNA gene	Chr12:110741387-110741461 (+)
BALB/cJ	MGP_BALBcJ_G0038653	snoRNA gene	Chr12:108077906-108077980 (+)
C3H/HeJ	MGP_C3HHeJ_G0038315	snoRNA gene	Chr12:111186768-111186842 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039198	snoRNA gene	Chr12:115333324-115333398 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035954	snoRNA gene	Chr12:104127398-104127472 (+)
CAST/EiJ	MGP_CASTEiJ_G0037456	snoRNA gene	Chr12:106146054-106146128 (+)
CBA/J	MGP_CBAJ_G0038287	snoRNA gene	Chr12:119871167-119871241 (+)
DBA/2J	MGP_DBA2J_G0038476	snoRNA gene	Chr12:107161819-107161893 (+)
FVB/NJ	MGP_FVBNJ_G0038429	snoRNA gene	Chr12:105952488-105952562 (+)
LP/J	MGP_LPJ_G0038515	snoRNA gene	Chr12:111745671-111745745 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038427	snoRNA gene	Chr12:123030197-123030271 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039301	snoRNA gene	Chr12:110227222-110227296 (+)
PWK/PhJ	MGP_PWKPhJ_G0037142	snoRNA gene	Chr12:101771308-101771382 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036899	snoRNA gene	Chr12:104392860-104392934 (+)
WSB/EiJ	MGP_WSBEiJ_G0037689	snoRNA gene	Chr12:111143341-111143415 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	115488055	NCBI Gene Model \| MGI Sequence Detail	75	C57BL/6J	± kb
	transcript	AF357341	GenBank \| ENA \| DDBJ \| MGI Sequence Detail	58	Not Specified

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Summaries

All 7

Developmental Gene Expression 1
Earliest

J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
Latest

J:93285 Cavaille J, et al., Identification of tandemly-repeated C/D snoRNA genes at the imprinted human 14q32 domain reminiscent of those at the Prader-Willi/Angelman syndrome region. Hum Mol Genet. 2002 Jul 15;11(13):1527-38

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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