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AY702102 Gene Detail
Summary
  • Symbol
    AY702102
  • Name
    cDNA sequence AY702102
  • Synonyms
    STDP1
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3525150
    NCBI Gene: 446211
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:169803935-169805107 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 89.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    158 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3525150
 lncRNA gene Chr2:169803933-169805107 (-)
129S1/SvImJ MGP_129S1SvImJ_G0001053
 unclassified gene Chr2:175969588-175970760 (-)
A/J MGP_AJ_G0001033
 unclassified gene Chr2:168621674-168622846 (-)
AKR/J MGP_AKRJ_G0001018
 unclassified gene Chr2:173675450-173676622 (-)
BALB/cJ MGP_BALBcJ_G0001025
 unclassified gene Chr2:168999366-169000538 (-)
C3H/HeJ MGP_C3HHeJ_G0001007
 unclassified gene Chr2:174055034-174056206 (-)
C57BL/6NJ MGP_C57BL6NJ_G0001139
 unclassified gene Chr2:181034957-181036129 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000864
 unclassified gene Chr2:161929579-161930749 (-)
CAST/EiJ MGP_CASTEiJ_G0000992
 unclassified gene Chr2:174603718-174604892 (-)
CBA/J MGP_CBAJ_G0000999
 unclassified gene Chr2:187787260-187788432 (-)
DBA/2J MGP_DBA2J_G0001003
 unclassified gene Chr2:167721860-167723032 (-)
FVB/NJ MGP_FVBNJ_G0001013
 unclassified gene Chr2:166315226-166316398 (-)
LP/J MGP_LPJ_G0001060
 unclassified gene Chr2:175944262-175945434 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0001003
 unclassified gene Chr2:190920614-190921786 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0001131
 unclassified gene Chr2:173617176-173618348 (-)
PWK/PhJ MGP_PWKPhJ_G0000949
 unclassified gene Chr2:167429630-167430802 (-)
SPRET/EiJ MGP_SPRETEiJ_G0000925
 unclassified gene Chr2:172622451-172623624 (-)
WSB/EiJ MGP_WSBEiJ_G0001005
 unclassified gene Chr2:174555866-174557038 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103935 Ensembl Gene Model | MGI Sequence Detail 1173 C57BL/6J ±  kb
transcript NR_131974 RefSeq | MGI Sequence Detail 1175 C57BL/6  
polypeptide Q66V79 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 15
  • Earliest
    J:97250 Hong S, et al., Identification and integrative analysis of 28 novel genes specifically expressed and developmentally regulated in murine spermatogenic cells. J Biol Chem. 2005 Mar 4;280(9):7685-93
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory