Ear-ps10 Pseudogene Detail

Summary

• Symbol
  Ear-ps10
• Name
  eosinophil-associated, ribonuclease A family, pseudogene 10

• Feature Type
  pseudogene
• IDs
  MGI:3528640
  NCBI Gene: 503495
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:44229171-44229630 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 22.52 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  193 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3528640	pseudogene	Chr14:44229171-44229637 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040074	pseudogene	Chr14:37590406-37590865 (+)
A/J	MGP_AJ_G0040076	pseudogene	Chr14:36240998-36241457 (+)
AKR/J	MGP_AKRJ_G0039998	pseudogene	Chr14:37744225-37744684 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0039701	pseudogene	Chr14:37660641-37661100 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040644	pseudogene	Chr14:39099582-39100041 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0039673	pseudogene	Chr14:48437746-48438200 (-)
DBA/2J	MGP_DBA2J_G0039873	pseudogene	Chr14:43674227-43674681 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0039916	pseudogene	Chr14:45584622-45585081 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039823	pseudogene	Chr14:47951371-48082876 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040735	pseudogene	Chr14:37431072-37431531 (-)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0038211	pseudogene	Chr14:41132942-41147537 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Ear-ps10
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Ear-ps10
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000090109 (Evidence)
• NCBI Gene
  503495

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090109	Ensembl Gene Model | MGI Sequence Detail	460	C57BL/6J
transcript	ENSMUST00000161871	Ensembl | MGI Sequence Detail	460	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:95949 Cho S, et al., The ribonuclease A superfamily of mammals and birds: identifying new members and tracing evolutionary histories. Genomics. 2005 Feb;85(2):208-20