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Ermardl2 Gene Detail
Summary
  • Symbol
    Ermardl2
  • Name
    ER membrane associated RNA degradation like 2
  • Synonyms
    9030025P20Rik, D17Zt9e
  • Feature Type
    protein coding gene
  • IDs
    MGI:3583895
    NCBI Gene: 100041574
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr17:15199078-15211839 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 8.95 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3583895
 protein coding gene Chr17:15198730-15211839 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    ERMARD, ER membrane associated RNA degradation
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ERMARD, ER membrane associated RNA degradation
  • Synonyms
    C6orf70, dJ266L20.3, PVNH6
  • Links
    NCBI Gene ID: 55780
    neXtProt AC: NX_Q5T6L9
    UniProt: Q5T6L9

  • Chr Location
    6q27; chr6:169751306-169781600 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human ERMARD associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100041574 NCBI Gene Model | MGI Sequence Detail 12762 C57BL/6J ±  kb
transcript NM_001123370 RefSeq | MGI Sequence Detail 2120 ZRU/MplStud  
polypeptide NP_001116842 RefSeq | MGI Sequence Detail 438 ZRU/MplStud  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR025209 Domain of unknown function DUF4209
    IPR039635 Endoplasmic reticulum membrane-associated RNA degradation protein
Molecular
Reagents
less
  • All nucleic 13
    Genomic 4
    cDNA 9

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-37187, MGI:108148, MGI:7447212
References
more
  • Summaries
    All 17
    Phenotypes 1
  • Earliest
    J:39622 Trachtulec Z, et al., Isolation of candidate hybrid sterility 1 genes by cDNA selection in a 1.1 megabase pair region on mouse chromosome 17. Mamm Genome. 1997 May;8(5):312-6
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory