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Atxn7l1 Gene Detail
Summary
  • Symbol
    Atxn7l1
  • Name
    ataxin 7-like 1
  • Synonyms
    2810423G08Rik, Atxn7l4
  • Feature Type
    protein coding gene
  • IDs
    MGI:3584458
    NCBI Gene: 380753
  • Alliance
    gene page
  • Transcription Start Sites
    22 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:33197692-33423184 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 14.03 cM, cytoband B2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5902 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3584458
 protein coding gene Chr12:33196967-33426407 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019674
 protein coding gene Chr12:31212523-31438294 (+)
A/J MGP_AJ_G0019641
 protein coding gene Chr12:30274734-30503461 (+)
AKR/J MGP_AKRJ_G0019612
 protein coding gene Chr12:31264435-31491758 (+)
BALB/cJ MGP_BALBcJ_G0019618
 protein coding gene Chr12:30500444-30722937 (+)
C3H/HeJ MGP_C3HHeJ_G0019422
 protein coding gene Chr12:31115042-31345079 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020065
 protein coding gene Chr12:32132457-32377420 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017690
 protein coding gene Chr12:29562973-29784506 (+)
CAST/EiJ MGP_CASTEiJ_G0018977
 protein coding gene Chr12:26157399-26401075 (+)
CBA/J MGP_CBAJ_G0019394
 protein coding gene Chr12:33172689-33416453 (+)
DBA/2J MGP_DBA2J_G0019507
 protein coding gene Chr12:30094076-30321035 (+)
FVB/NJ MGP_FVBNJ_G0019498
 protein coding gene Chr12:29882081-30112967 (+)
LP/J MGP_LPJ_G0019577
 protein coding gene Chr12:31284726-31515658 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019533
 protein coding gene Chr12:32799416-33033524 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020105
 protein coding gene Chr12:30764856-30992491 (+)
PWK/PhJ MGP_PWKPhJ_G0018744
 protein coding gene Chr12:24868413-25096229 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018532
 protein coding gene Chr12:25390793-25633896 (+)
WSB/EiJ MGP_WSBEiJ_G0019027
 protein coding gene Chr12:31010684-31239192 (+)



Homology
more
  • Human Ortholog
    ATXN7L1, ataxin 7 like 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ATXN7L1, ataxin 7 like 1
  • Synonyms
    ATXN7L4
  • Links
    NCBI Gene ID: 222255
    neXtProt AC: NX_Q9ULK2
    UniProt: Q9ULK2

  • Chr Location
    7q22.3
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    12
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020564 Ensembl Gene Model | MGI Sequence Detail 225493 C57BL/6J ±  kb
transcript ENSMUST00000146040 Ensembl | MGI Sequence Detail 2973 Not Applicable  
polypeptide ENSMUSP00000122156 Ensembl | MGI Sequence Detail 927 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    Genomic 1
    cDNA 12

    Microarray probesets 6
Other
Accession IDs
less
MGI:1919424
References
more
  • Summaries
    All 28
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory