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F830016B08Rik Gene Detail
Summary
  • Symbol
    F830016B08Rik
  • Name
    RIKEN cDNA F830016B08 gene
  • Synonyms
    Ifgga4
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588218
    NCBI Gene: 240328
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:60426452-60436088 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 34.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    373 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588218
 protein coding gene Chr18:60421811-60438162 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024459
 protein coding gene Chr18:60043288-60052340 (+)
A/J MGP_AJ_G0024427
 protein coding gene Chr18:57533339-57544032 (+)
AKR/J MGP_AKRJ_G0024396
 protein coding gene Chr18:59104185-59113312 (+)
BALB/cJ MGP_BALBcJ_G0024425
 protein coding gene Chr18:57645747-57654857 (+)
C3H/HeJ MGP_C3HHeJ_G0024193
 protein coding gene Chr18:59342044-59353430 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024872
 protein coding gene Chr18:61763972-61773238 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0024163
 protein coding gene Chr18:63772694-63788820 (+)
DBA/2J MGP_DBA2J_G0024293
 protein coding gene Chr18:57209865-57218941 (+)
FVB/NJ MGP_FVBNJ_G0024259
 protein coding gene Chr18:56593748-56596449 (+)
LP/J MGP_LPJ_G0024377
 protein coding gene Chr18:59910856-59919908 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0024919
 protein coding gene Chr18:59241076-59250515 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0023730
 protein coding gene Chr18:59153217-59167536 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090942 Ensembl Gene Model | MGI Sequence Detail 9637 C57BL/6J ±  kb
transcript ENSMUST00000171297 Ensembl | MGI Sequence Detail 3297 Not Applicable  
polypeptide ENSMUSP00000131437 Ensembl | MGI Sequence Detail 416 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR051515 Immunity-related GTPase
    IPR007743 Immunity-related GTPases-like
    IPR030385 IRG-type guanine nucleotide-binding (G) domain
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 12
    Gene Ontology 1
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:303164 Schwerbel K, et al., Immunity-related GTPase induces lipophagy to prevent excess hepatic lipid accumulation. J Hepatol. 2020 Oct;73(4):771-782
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory