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4930567H17Rik Gene Detail
Summary
  • Symbol
    4930567H17Rik
  • Name
    RIKEN cDNA 4930567H17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3588249
    NCBI Gene: 619303
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:69437507-69438346 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 36.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    99 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588249
 lncRNA gene ChrX:69437507-69438346 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0035761
 protein coding gene ChrX:66158921-66159748 (-)
AKR/J MGP_AKRJ_G0035683
 protein coding gene ChrX:68134442-68135281 (+)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0034744
 protein coding gene ChrX:52051312-52052226 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0035579
 protein coding gene ChrX:65710523-65711350 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0035667
 protein coding gene ChrX:66821553-66822392 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0036300
 protein coding gene ChrX:66010673-66011500 (+)
PWK/PhJ MGP_PWKPhJ_G0034442
 protein coding gene ChrX:49980757-49989303 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0034886
 protein coding gene ChrX:65384220-65385059 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from multigenic genotypes
    1 phenotype reference
Mice hemizygous for a null allele of 4930567H17Rik and Gm14725 exhibit normal male fertility despite slightly longer than normal sperm hooks.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 619303 NCBI Gene Model | MGI Sequence Detail 840 C57BL/6J ±  kb
transcript NR_157388 RefSeq | MGI Sequence Detail 840 C57BL/6  
polypeptide Q3V0K5 UniProt | EBI | MGI Sequence Detail 233 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 1
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:334464 Stark-Dykema ER, et al., X-linked palindromic gene families 4930567H17Rik and Mageb5 are dispensable for male mouse fertility. Sci Rep. 2022 May 20;12(1):8554
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory