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5830444B04Rik Gene Detail
Summary
  • Symbol
    5830444B04Rik
  • Name
    RIKEN cDNA 5830444B04 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3603170
    NCBI Gene: 641454
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:155485426-155506161 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 86.17 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    738 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3603170
 lncRNA gene Chr4:155483220-155506161 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015586
 unclassified non-coding RNA gene Chr4:159722742-159746977 (-)
A/J MGP_AJ_G0015563
 unclassified non-coding RNA gene Chr4:153014943-153038368 (-)
AKR/J MGP_AKRJ_G0015527
 unclassified non-coding RNA gene Chr4:157173338-157197263 (-)
BALB/cJ MGP_BALBcJ_G0015525
 unclassified non-coding RNA gene Chr4:153485414-153509477 (-)
C3H/HeJ MGP_C3HHeJ_G0015347
 unclassified non-coding RNA gene Chr4:157714588-157741918 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015978
 unclassified non-coding RNA gene Chr4:165409505-165433914 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013713
 unclassified non-coding RNA gene Chr4:145309552-145333904 (-)
CAST/EiJ MGP_CASTEiJ_G0014902
 unclassified non-coding RNA gene Chr4:155156013-155180303 (-)
CBA/J MGP_CBAJ_G0015328
 unclassified non-coding RNA gene Chr4:170381046-170414433 (-)
DBA/2J MGP_DBA2J_G0015421
 unclassified non-coding RNA gene Chr4:153030723-153058657 (-)
FVB/NJ MGP_FVBNJ_G0015429
 unclassified non-coding RNA gene Chr4:152274197-152299585 (-)
LP/J MGP_LPJ_G0015502
 unclassified non-coding RNA gene Chr4:159646696-159673944 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015452
 unclassified non-coding RNA gene Chr4:173230270-173256559 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016020
 unclassified non-coding RNA gene Chr4:157785790-157810086 (-)
PWK/PhJ MGP_PWKPhJ_G0014687
 unclassified non-coding RNA gene Chr4:149164834-149194556 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014475
 unclassified non-coding RNA gene Chr4:152055925-152080429 (-)
WSB/EiJ MGP_WSBEiJ_G0015007
 unclassified non-coding RNA gene Chr4:157960584-157986054 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    34
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic 641454 NCBI Gene Model | MGI Sequence Detail 20736 C57BL/6J ±  kb
transcript NR_102283 RefSeq | MGI Sequence Detail 2786 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 10
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory