Mir103-2 MGI Mouse Gene Detail - MGI:3619059

Symbol

Mir103-2
Name

microRNA 103-2
Synonyms

mir 103-2, mir-103-2, Mirn103-2, mmu-mir-103-2

Feature Type

miRNA gene
IDs

MGI:3619059
NCBI Gene: 723825
Alliance

gene page
Transcription Start Sites

1 TSS

Sequence Map

Chr2:131129972-131130057 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 2, 63.31 cM
Mapping Data

1 experiment

SNPs within 2kb

72 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3619059	miRNA gene	Chr2:131129972-131130057 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008593	miRNA gene	Chr2:134806487-134806572 (+)
A/J	MGP_AJ_G0008580	miRNA gene	Chr2:129335327-129335412 (+)
AKR/J	MGP_AKRJ_G0008567	miRNA gene	Chr2:133068300-133068385 (+)
BALB/cJ	MGP_BALBcJ_G0008567	miRNA gene	Chr2:129723802-129723887 (+)
C3H/HeJ	MGP_C3HHeJ_G0008508	miRNA gene	Chr2:133506805-133506890 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008778	miRNA gene	Chr2:138942910-138942995 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007757	miRNA gene	Chr2:124076018-124076103 (+)
CAST/EiJ	MGP_CASTEiJ_G0008365	miRNA gene	Chr2:133788025-133788110 (+)
CBA/J	MGP_CBAJ_G0008474	miRNA gene	Chr2:144121108-144121193 (+)
DBA/2J	MGP_DBA2J_G0008509	miRNA gene	Chr2:128724528-128724613 (+)
FVB/NJ	MGP_FVBNJ_G0008529	miRNA gene	Chr2:127354576-127354661 (+)
LP/J	MGP_LPJ_G0008600	miRNA gene	Chr2:135037594-135037679 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008490	miRNA gene	Chr2:147935304-147935389 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008764	miRNA gene	Chr2:133036319-133036404 (+)
PWK/PhJ	MGP_PWKPhJ_G0008288	miRNA gene	Chr2:128300035-128300120 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0008145	miRNA gene	Chr2:132185454-132185539 (+)
WSB/EiJ	MGP_WSBEiJ_G0008449	miRNA gene	Chr2:133947895-133947980 (+)

Human Ortholog

MIR103A2, microRNA 103a-2

Vertebrate Orthologs

1

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

MIR103A2, microRNA 103a-2
Synonyms

MIR103-2, mir-103a-2, MIRN103-2
Links

HGNC:31491

NCBI Gene ID: 406896
Chr Location

chr20:3917494-3917571 (+) GRCh38

MGI Vertebrate Homology

Mir103-2 stringent orthology
1 human;1 mouse
HCOP

vertebrate homology predictions: MIR103A2
Gene Tree

Mir103-2

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Phenotype Summary

3 phenotype references

All Mutations and Alleles

2
Chemically induced (other)

1
Radiation induced

1
Genomic Mutations

2 involving Mir103-2
Find Mice (IMSR)

0 strains or lines available

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All GO Annotations

7
GO References

5

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

767
Tissues

46
Literature Summary

10

Images

Tissue x Stage Matrix

Other Mouse Links

GEO

Expression Atlas

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All Sequences

23
RefSeq

1

Ensembl

ENSMUSG00000065563 (Evidence)
NCBI Gene

723825

Representative Sequences				Length	Strain/Species	Flank
	genomic	723825	NCBI Gene Model \| MGI Sequence Detail	86	C57BL/6J	± kb
	transcript	NR_029755	RefSeq \| MGI Sequence Detail	86	C57BL/6

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All nucleic 5

Primer pair 2

Other 3

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miRBase

MI0000588

Summaries

All 29

Developmental Gene Expression 10

Gene Ontology 5

Phenotypes 3
Earliest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Latest

J:313935 Fishman ES, et al., MicroRNA Signatures of the Developing Primate Fovea. Front Cell Dev Biol. 2021;9:654385

TSS for Mir103-2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr20262	Chr2:131129241-131129244 (+)	-729 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24