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Mir106a Gene Detail
Summary
  • Symbol
    Mir106a
  • Name
    microRNA 106a
  • Synonyms
    mir 106a, Mirn106a, mmu-mir-106a
  • Feature Type
    miRNA gene
  • IDs
    MGI:3619120
    NCBI Gene: 723829
  • Member of
    Mirc2 cluster
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:51831380-51831444 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 29.15 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3619120
 miRNA gene ChrX:51831380-51831444 (-)
129S1/SvImJ MGP_129S1SvImJ_G0009281
 miRNA gene ChrX:47958693-47958757 (-)
A/J MGP_AJ_G0009262
 miRNA gene ChrX:47818985-47819049 (-)
AKR/J MGP_AKRJ_G0009252
 miRNA gene ChrX:49115206-49115270 (-)
BALB/cJ MGP_BALBcJ_G0009246
 miRNA gene ChrX:47349152-47349216 (-)
C3H/HeJ MGP_C3HHeJ_G0009186
 miRNA gene ChrX:48220275-48220339 (-)
C57BL/6NJ MGP_C57BL6NJ_G0009489
 miRNA gene ChrX:49101316-49101380 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0008334
 miRNA gene ChrX:45277715-45277779 (-)
CAST/EiJ MGP_CASTEiJ_G0009012
 miRNA gene ChrX:35658875-35658939 (-)
CBA/J MGP_CBAJ_G0009154
 miRNA gene ChrX:50452365-50452429 (-)
DBA/2J MGP_DBA2J_G0009183
 miRNA gene ChrX:47602208-47602272 (-)
FVB/NJ MGP_FVBNJ_G0009200
 miRNA gene ChrX:47314113-47314177 (-)
LP/J MGP_LPJ_G0009279
 miRNA gene ChrX:48283696-48283760 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0009167
 miRNA gene ChrX:51992921-51992985 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0009459
 miRNA gene ChrX:47837655-47837719 (-)
PWK/PhJ MGP_PWKPhJ_G0008940
 miRNA gene ChrX:35152463-35152527 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008778
 miRNA gene ChrX:36462456-36462520 (-)
WSB/EiJ MGP_WSBEiJ_G0009111
 miRNA gene ChrX:47395571-47395635 (-)



Homology
more
  • Human Ortholog
    MIR106A, microRNA 106a
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR106A, microRNA 106a
  • Synonyms
    mir-106, mir-106a, MIRN106A
  • Links
    NCBI Gene ID: 406899

  • Chr Location
    chrX:134170198-134170278 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    50
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    759
  • Tissues
    29
  • Literature Summary
    15
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 723829 NCBI Gene Model | MGI Sequence Detail 65 C57BL/6J ±  kb
transcript NR_029657 RefSeq | MGI Sequence Detail 65 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 7
    Primer pair 3
    Other 4
Other Database
Links
less
miRBase MI0000406
References
more
  • Summaries
    All 34
    Developmental Gene Expression 15
    Gene Ontology 6
    Phenotypes 2
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
  • Latest
    J:358010 Chen Y, et al., MiR-106a-5p targets PFKFB3 and improves sepsis through regulating macrophage pyroptosis and inflammatory response. J Biol Chem. 2024 Jun;300(6):107334
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory