Mir341 Gene Detail

Summary

• Symbol
  Mir341
• Name
  microRNA 341
• Synonyms
  mir 341, Mirn341, mmu-mir-341

• Feature Type
  miRNA gene
• IDs
  MGI:3619357
  NCBI Gene: 723846
• Member of
  Mirc43 cluster
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:109577934-109578029 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 60.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3619357	miRNA gene	Chr12:109577934-109578029 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007974	miRNA gene	Chr12:111841491-111841586 (+)
A/J	MGP_AJ_G0007968	miRNA gene	Chr12:107534357-107534452 (+)
AKR/J	MGP_AKRJ_G0007945	miRNA gene	Chr12:110671608-110671703 (+)
BALB/cJ	MGP_BALBcJ_G0007947	miRNA gene	Chr12:108007806-108007901 (+)
C3H/HeJ	MGP_C3HHeJ_G0007893	miRNA gene	Chr12:111113995-111114090 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008128	miRNA gene	Chr12:115259757-115259852 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007255	miRNA gene	Chr12:104061290-104061385 (+)
CAST/EiJ	MGP_CASTEiJ_G0007781	miRNA gene	Chr12:106064299-106064390 (+)
CBA/J	MGP_CBAJ_G0007863	miRNA gene	Chr12:119798840-119798935 (+)
DBA/2J	MGP_DBA2J_G0007898	miRNA gene	Chr12:107089375-107089470 (+)
FVB/NJ	MGP_FVBNJ_G0007917	miRNA gene	Chr12:105880089-105880184 (+)
LP/J	MGP_LPJ_G0007979	miRNA gene	Chr12:111670110-111670205 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007888	miRNA gene	Chr12:122956216-122956311 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008123	miRNA gene	Chr12:110153197-110153292 (+)
PWK/PhJ	MGP_PWKPhJ_G0007703	miRNA gene	Chr12:101698202-101698297 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007600	miRNA gene	Chr12:104323118-104323213 (+)
WSB/EiJ	MGP_WSBEiJ_G0007850	miRNA gene	Chr12:111067266-111067361 (+)

Homology

• Gene Tree
  Mir341
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  710
• Tissues
  1
• Literature Summary
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000070101 (Evidence)
• NCBI Gene
  723846

Representative Sequences			Length	Strain/Species
genomic	723846	NCBI Gene Model | MGI Sequence Detail	96	C57BL/6J
transcript	NR_029770	RefSeq | MGI Sequence Detail	96	C57BL/6

Molecular
Reagents

• All nucleic 2

  Primer pair 1

  Other 1

Other Database
Links

miRBase

MI0000625

References

• Summaries
  All 9

  Developmental Gene Expression 2

  Phenotypes 1
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:344890 Zhang L, et al., Meg8-DMR as the Secondary Regulatory Region Regulates the Expression of MicroRNAs While It Does Not Affect Embryonic Development in Mice. Genes (Basel). 2023 Jun 14;14(6)

TSS for Mir341:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr115147	Chr12:109576130-109576134 (+)	-1,802 bp