Mir698 Gene Detail

Summary

• Symbol
  Mir698
• Name
  microRNA 698
• Synonyms
  mir-698, Mirn698, mmu-mir-698

• Feature Type
  miRNA gene
• IDs
  MGI:3629653
  NCBI Gene: 735263
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr4:124637574-124637682 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 57.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3629653	miRNA gene	Chr4:124637574-124637682 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008755	miRNA gene	Chr4:126289968-126290076 (+)
A/J	MGP_AJ_G0008738	miRNA gene	Chr4:121340203-121340311 (+)
AKR/J	MGP_AKRJ_G0008731	miRNA gene	Chr4:124645351-124645459 (+)
BALB/cJ	MGP_BALBcJ_G0008729	miRNA gene	Chr4:121915543-121915651 (+)
C3H/HeJ	MGP_C3HHeJ_G0008669	miRNA gene	Chr4:124748541-124748649 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008948	miRNA gene	Chr4:131162501-131162609 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007896	miRNA gene	Chr4:114512019-114512127 (+)
CAST/EiJ	MGP_CASTEiJ_G0008511	miRNA gene	Chr4:122806645-122806753 (+)
CBA/J	MGP_CBAJ_G0008635	miRNA gene	Chr4:134414241-134414349 (+)
DBA/2J	MGP_DBA2J_G0008665	miRNA gene	Chr4:121817321-121817429 (+)
FVB/NJ	MGP_FVBNJ_G0008686	miRNA gene	Chr4:120440084-120440192 (+)
LP/J	MGP_LPJ_G0008760	miRNA gene	Chr4:126594883-126594991 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008651	miRNA gene	Chr4:139415594-139415702 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008929	miRNA gene	Chr4:125022535-125022643 (+)
PWK/PhJ	MGP_PWKPhJ_G0008440	miRNA gene	Chr4:118230671-118230779 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0008292	miRNA gene	Chr4:120795462-120795570 (+)
WSB/EiJ	MGP_WSBEiJ_G0008608	miRNA gene	Chr4:125096838-125096946 (+)

Homology

• Gene Tree
  Mir698
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  2
• Radiation induced
  1
• Targeted
  2
• Genomic Mutations
  4 involving Mir698
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000076119 (Evidence)
• NCBI Gene
  735263

Representative Sequences			Length	Strain/Species
genomic	735263	NCBI Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	NR_030480	RefSeq | MGI Sequence Detail	109	C57BL/6

Molecular
Reagents

• All nucleic 1

  Other 1

Other Database
Links

miRBase

MI0004682

References

• Summaries
  All 15

  Developmental Gene Expression 1

  Phenotypes 7
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:183008 Li Y, et al., Isolation of fetal gonads from embryos of timed-pregnant mice for morphological and molecular studies. Methods Mol Biol. 2012;825:3-16

TSS for Mir698:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38910	Chr4:124636710-124636722 (+)	-858 bp
Tssr38911	Chr4:124636725-124636736 (+)	-843 bp