Gm10029 Pseudogene Detail

Summary

• Symbol
  Gm10029
• Name
  predicted gene 10029

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3641706
  NCBI Gene: 100039532
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:6712601-6712930 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 3.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641706	pseudogene	Chr13:6712571-6713008 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014205	pseudogene	Chr9:91169309-91169592 (-)
A/J	MGP_AJ_G0014222	pseudogene	Chr9:88011428-88011711 (-)
AKR/J	MGP_AKRJ_G0014148	pseudogene	Chr9:90084428-90084711 (-)
BALB/cJ	MGP_BALBcJ_G0014172	pseudogene	Chr9:87668169-87668452 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0014623	pseudogene	Chr9:93722538-93722812 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0014070	pseudogene	Chr9:87559452-87559735 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0014155	pseudogene	Chr9:91409380-91409663 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014102	pseudogene	Chr9:98572769-98573052 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014593	pseudogene	Chr9:90312088-90312371 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm10029
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15
• RefSeq
  2

• Ensembl
  ENSMUSG00000068324 (Evidence)
• NCBI Gene
  100039532

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000068324	Ensembl Gene Model | MGI Sequence Detail	330	C57BL/6J
transcript	ENSMUST00000089635	Ensembl | MGI Sequence Detail	330	Not Applicable
polypeptide	XP_036014159	RefSeq | MGI Sequence Detail	110	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;